Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AP005264.5-201ENST00000590066 467 ntBASIC19.57■□□□□ 0.72
COL16A1Q07092 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC19.57■□□□□ 0.72
COL16A1Q07092 AC020922.4-201ENST00000621389 339 ntBASIC19.57■□□□□ 0.72
COL16A1Q07092 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL16A1Q07092 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL16A1Q07092 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL16A1Q07092 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC19.57■□□□□ 0.72
COL16A1Q07092 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
COL16A1Q07092 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL16A1Q07092 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.56■□□□□ 0.72
COL16A1Q07092 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.56■□□□□ 0.72
COL16A1Q07092 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
COL16A1Q07092 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL16A1Q07092 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COL16A1Q07092 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC19.56■□□□□ 0.72
COL16A1Q07092 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL16A1Q07092 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.56■□□□□ 0.72
COL16A1Q07092 RN7SL173P-201ENST00000461853 292 ntBASIC19.56■□□□□ 0.72
COL16A1Q07092 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC19.56■□□□□ 0.72
COL16A1Q07092 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC19.56■□□□□ 0.72
COL16A1Q07092 LY6E-215ENST00000523847 427 ntTSL 3 BASIC19.56■□□□□ 0.72
COL16A1Q07092 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC19.56■□□□□ 0.72
COL16A1Q07092 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL16A1Q07092 AC254633.1-201ENST00000606790 345 ntBASIC19.56■□□□□ 0.72
COL16A1Q07092 AC010503.4-201ENST00000615487 688 ntBASIC19.56■□□□□ 0.72
COL16A1Q07092 BX322534.1-201ENST00000635574 241 ntBASIC19.56■□□□□ 0.72
COL16A1Q07092 AC215524.1-201ENST00000635696 241 ntBASIC19.56■□□□□ 0.72
COL16A1Q07092 AC139713.2-207ENST00000641556 1292 ntBASIC19.56■□□□□ 0.72
COL16A1Q07092 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL16A1Q07092 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.56■□□□□ 0.72
COL16A1Q07092 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL16A1Q07092 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL16A1Q07092 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
COL16A1Q07092 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC19.56■□□□□ 0.72
COL16A1Q07092 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.56■□□□□ 0.72
COL16A1Q07092 PCDHA12-202ENST00000613593 2588 ntBASIC19.56■□□□□ 0.72
COL16A1Q07092 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL16A1Q07092 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL16A1Q07092 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL16A1Q07092 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL16A1Q07092 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL16A1Q07092 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC19.56■□□□□ 0.72
COL16A1Q07092 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC19.55■□□□□ 0.72
COL16A1Q07092 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.55■□□□□ 0.72
COL16A1Q07092 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
COL16A1Q07092 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC19.55■□□□□ 0.72
COL16A1Q07092 AC006328.1-201ENST00000437571 379 ntBASIC19.55■□□□□ 0.72
COL16A1Q07092 AL356000.1-201ENST00000441073 1238 ntBASIC19.55■□□□□ 0.72
COL16A1Q07092 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC19.55■□□□□ 0.72
COL16A1Q07092 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL16A1Q07092 MIR4746-201ENST00000579802 71 ntBASIC19.55■□□□□ 0.72
COL16A1Q07092 AL450487.2-201ENST00000615934 407 ntBASIC19.55■□□□□ 0.72
COL16A1Q07092 AC090386.2-201ENST00000623010 1039 ntBASIC19.55■□□□□ 0.72
COL16A1Q07092 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL16A1Q07092 ODCP-201ENST00000459650 1639 ntBASIC19.55■□□□□ 0.72
COL16A1Q07092 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL16A1Q07092 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC19.55■□□□□ 0.72
COL16A1Q07092 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL16A1Q07092 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL16A1Q07092 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL16A1Q07092 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL16A1Q07092 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC19.55■□□□□ 0.72
COL16A1Q07092 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL16A1Q07092 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.55■□□□□ 0.72
COL16A1Q07092 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.55■□□□□ 0.72
COL16A1Q07092 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL16A1Q07092 MIR611-201ENST00000384869 67 ntBASIC19.54■□□□□ 0.72
COL16A1Q07092 HNRNPA1P25-201ENST00000422644 937 ntBASIC19.54■□□□□ 0.72
COL16A1Q07092 GRPEL2P1-201ENST00000453145 339 ntBASIC19.54■□□□□ 0.72
COL16A1Q07092 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL16A1Q07092 CDK4P1-201ENST00000454213 828 ntBASIC19.54■□□□□ 0.72
COL16A1Q07092 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC19.54■□□□□ 0.72
COL16A1Q07092 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL16A1Q07092 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL16A1Q07092 BMF-206ENST00000558774 671 ntTSL 3 BASIC19.54■□□□□ 0.72
COL16A1Q07092 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC19.54■□□□□ 0.72
COL16A1Q07092 AL136982.5-201ENST00000605222 294 ntBASIC19.54■□□□□ 0.72
COL16A1Q07092 ESR1-214ENST00000638569 132 ntTSL 5 BASIC19.54■□□□□ 0.72
COL16A1Q07092 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
COL16A1Q07092 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
COL16A1Q07092 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COL16A1Q07092 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL16A1Q07092 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL16A1Q07092 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC19.54■□□□□ 0.72
COL16A1Q07092 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL16A1Q07092 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL16A1Q07092 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
COL16A1Q07092 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL16A1Q07092 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC19.54■□□□□ 0.72
COL16A1Q07092 HLA-DMA-202ENST00000395303 1007 ntBASIC19.54■□□□□ 0.72
COL16A1Q07092 RN7SL788P-201ENST00000460504 316 ntBASIC19.54■□□□□ 0.72
COL16A1Q07092 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
COL16A1Q07092 NF1P11-201ENST00000621292 1282 ntBASIC19.54■□□□□ 0.72
COL16A1Q07092 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
COL16A1Q07092 AC012313.1-201ENST00000593393 3059 ntBASIC19.54■□□□□ 0.72
COL16A1Q07092 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL16A1Q07092 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC19.53■□□□□ 0.72
COL16A1Q07092 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.53■□□□□ 0.72
COL16A1Q07092 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COL16A1Q07092 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms