Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX6-1P78426 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.41□□□□□ -0.26
NKX6-1P78426 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 AC016694.1-201ENST00000434179 700 ntBASIC13.41□□□□□ -0.26
NKX6-1P78426 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX6-1P78426 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
NKX6-1P78426 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NKX6-1P78426 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.41□□□□□ -0.26
NKX6-1P78426 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.41□□□□□ -0.26
NKX6-1P78426 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 AC009486.1-201ENST00000569860 813 ntBASIC13.41□□□□□ -0.26
NKX6-1P78426 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.41□□□□□ -0.26
NKX6-1P78426 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NKX6-1P78426 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.41□□□□□ -0.26
NKX6-1P78426 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 AC091271.1-201ENST00000611877 1162 ntBASIC13.41□□□□□ -0.26
NKX6-1P78426 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.41□□□□□ -0.26
NKX6-1P78426 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX6-1P78426 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 AP003680.1-201ENST00000598970 3660 ntBASIC13.41□□□□□ -0.26
NKX6-1P78426 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX6-1P78426 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
NKX6-1P78426 CICP14-201ENST00000629111 2732 ntBASIC13.41□□□□□ -0.26
NKX6-1P78426 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 AC067750.1-201ENST00000608826 6545 ntBASIC13.4□□□□□ -0.26
NKX6-1P78426 PTENP1-202ENST00000532280 3996 ntBASIC13.4□□□□□ -0.26
NKX6-1P78426 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX6-1P78426 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
NKX6-1P78426 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NKX6-1P78426 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX6-1P78426 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX6-1P78426 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX6-1P78426 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NKX6-1P78426 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.4□□□□□ -0.26
NKX6-1P78426 VDAC1P7-201ENST00000462417 847 ntBASIC13.4□□□□□ -0.26
NKX6-1P78426 AC026410.3-201ENST00000514280 936 ntBASIC13.4□□□□□ -0.26
NKX6-1P78426 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX6-1P78426 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.4□□□□□ -0.26
NKX6-1P78426 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX6-1P78426 AC124283.3-201ENST00000570869 594 ntBASIC13.4□□□□□ -0.26
NKX6-1P78426 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.4□□□□□ -0.26
NKX6-1P78426 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX6-1P78426 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.4□□□□□ -0.26
NKX6-1P78426 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX6-1P78426 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX6-1P78426 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX6-1P78426 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NKX6-1P78426 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX6-1P78426 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
NKX6-1P78426 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NKX6-1P78426 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-1P78426 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX6-1P78426 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms