Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.88□□□□□ -0.19
CDC42P60953 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CDC42P60953 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.88□□□□□ -0.19
CDC42P60953 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.88□□□□□ -0.19
CDC42P60953 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.88□□□□□ -0.19
CDC42P60953 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC42P60953 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC42P60953 AC009078.2-202ENST00000463353 338 ntBASIC13.88□□□□□ -0.19
CDC42P60953 KRT8P48-201ENST00000515599 1220 ntBASIC13.88□□□□□ -0.19
CDC42P60953 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC42P60953 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
CDC42P60953 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC42P60953 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.88□□□□□ -0.19
CDC42P60953 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
CDC42P60953 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC42P60953 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC42P60953 AC023090.2-201ENST00000625182 2110 ntBASIC13.88□□□□□ -0.19
CDC42P60953 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.88□□□□□ -0.19
CDC42P60953 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC42P60953 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDC42P60953 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CDC42P60953 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC42P60953 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC42P60953 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC42P60953 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC42P60953 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CDC42P60953 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.87□□□□□ -0.19
CDC42P60953 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.87□□□□□ -0.19
CDC42P60953 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.87□□□□□ -0.19
CDC42P60953 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.87□□□□□ -0.19
CDC42P60953 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CDC42P60953 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.87□□□□□ -0.19
CDC42P60953 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.87□□□□□ -0.19
CDC42P60953 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.87□□□□□ -0.19
CDC42P60953 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.87□□□□□ -0.19
CDC42P60953 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.87□□□□□ -0.19
CDC42P60953 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.87□□□□□ -0.19
CDC42P60953 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.87□□□□□ -0.19
CDC42P60953 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.87□□□□□ -0.19
CDC42P60953 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.87□□□□□ -0.19
CDC42P60953 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CDC42P60953 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.87□□□□□ -0.19
CDC42P60953 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CDC42P60953 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CDC42P60953 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CDC42P60953 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.87□□□□□ -0.19
CDC42P60953 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.87□□□□□ -0.19
CDC42P60953 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDC42P60953 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 KRT8P12-202ENST00000472924 1397 ntBASIC13.86□□□□□ -0.19
CDC42P60953 AC018665.1-201ENST00000622927 1362 ntBASIC13.86□□□□□ -0.19
CDC42P60953 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CDC42P60953 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms