Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.03□□□□□ -0.32
AP3S2P59780 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.03□□□□□ -0.32
AP3S2P59780 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.03□□□□□ -0.32
AP3S2P59780 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.03□□□□□ -0.32
AP3S2P59780 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
AP3S2P59780 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.03□□□□□ -0.32
AP3S2P59780 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.03□□□□□ -0.32
AP3S2P59780 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
AP3S2P59780 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
AP3S2P59780 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
AP3S2P59780 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.03□□□□□ -0.32
AP3S2P59780 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.03□□□□□ -0.32
AP3S2P59780 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.03□□□□□ -0.32
AP3S2P59780 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.03□□□□□ -0.32
AP3S2P59780 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
AP3S2P59780 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP3S2P59780 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
AP3S2P59780 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP3S2P59780 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP3S2P59780 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.02□□□□□ -0.32
AP3S2P59780 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
AP3S2P59780 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
AP3S2P59780 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.02□□□□□ -0.32
AP3S2P59780 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP3S2P59780 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
AP3S2P59780 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
AP3S2P59780 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
AP3S2P59780 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.02□□□□□ -0.33
AP3S2P59780 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.33
AP3S2P59780 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.02□□□□□ -0.33
AP3S2P59780 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.02□□□□□ -0.33
AP3S2P59780 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
AP3S2P59780 TSPY19P-201ENST00000418461 509 ntBASIC13.02□□□□□ -0.33
AP3S2P59780 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.02□□□□□ -0.33
AP3S2P59780 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
AP3S2P59780 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.02□□□□□ -0.33
AP3S2P59780 TSPY18P-201ENST00000441642 509 ntBASIC13.02□□□□□ -0.33
AP3S2P59780 SAPCD2P3-201ENST00000455031 850 ntBASIC13.02□□□□□ -0.33
AP3S2P59780 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.02□□□□□ -0.33
AP3S2P59780 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.02□□□□□ -0.33
AP3S2P59780 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
AP3S2P59780 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.02□□□□□ -0.33
AP3S2P59780 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.02□□□□□ -0.33
AP3S2P59780 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
AP3S2P59780 LILRP1-201ENST00000444199 1370 ntBASIC13.02□□□□□ -0.33
AP3S2P59780 AC018665.1-201ENST00000622927 1362 ntBASIC13.02□□□□□ -0.33
AP3S2P59780 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.02□□□□□ -0.33
AP3S2P59780 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.02□□□□□ -0.33
AP3S2P59780 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
AP3S2P59780 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.02□□□□□ -0.33
AP3S2P59780 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.02□□□□□ -0.33
AP3S2P59780 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
AP3S2P59780 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
AP3S2P59780 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP3S2P59780 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S2P59780 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S2P59780 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
AP3S2P59780 AL354702.1-201ENST00000442006 1960 ntBASIC13.01□□□□□ -0.33
AP3S2P59780 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.01□□□□□ -0.33
AP3S2P59780 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S2P59780 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
AP3S2P59780 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
AP3S2P59780 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
AP3S2P59780 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S2P59780 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms