Protein–RNA interactions for Protein: P55769

SNU13, NHP2-like protein 1, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13P55769 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.12□□□□□ -0.31
SNU13P55769 AC074044.1-201ENST00000609673 707 ntBASIC13.12□□□□□ -0.31
SNU13P55769 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.12□□□□□ -0.31
SNU13P55769 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 AC104581.4-201ENST00000623126 3052 ntBASIC13.12□□□□□ -0.31
SNU13P55769 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.12□□□□□ -0.31
SNU13P55769 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.12□□□□□ -0.31
SNU13P55769 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.12□□□□□ -0.31
SNU13P55769 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 LINC01230-201ENST00000625222 3017 ntBASIC13.12□□□□□ -0.31
SNU13P55769 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNU13P55769 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SNU13P55769 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.12□□□□□ -0.31
SNU13P55769 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.12□□□□□ -0.31
SNU13P55769 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SNU13P55769 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SNU13P55769 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SNU13P55769 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
SNU13P55769 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SNU13P55769 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.11□□□□□ -0.31
SNU13P55769 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SNU13P55769 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SNU13P55769 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.11□□□□□ -0.31
SNU13P55769 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.11□□□□□ -0.31
SNU13P55769 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.11□□□□□ -0.31
SNU13P55769 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.11□□□□□ -0.31
SNU13P55769 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.11□□□□□ -0.31
SNU13P55769 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.11□□□□□ -0.31
SNU13P55769 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.11□□□□□ -0.31
SNU13P55769 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SNU13P55769 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.11□□□□□ -0.31
SNU13P55769 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.11□□□□□ -0.31
SNU13P55769 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.11□□□□□ -0.31
SNU13P55769 AL390754.1-201ENST00000619088 582 ntBASIC13.11□□□□□ -0.31
SNU13P55769 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 AL121723.1-201ENST00000445194 1519 ntBASIC13.11□□□□□ -0.31
SNU13P55769 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.11□□□□□ -0.31
SNU13P55769 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
SNU13P55769 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SNU13P55769 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.11□□□□□ -0.31
SNU13P55769 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.11□□□□□ -0.31
SNU13P55769 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
SNU13P55769 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SNU13P55769 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
SNU13P55769 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNU13P55769 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SNU13P55769 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.1□□□□□ -0.31
SNU13P55769 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNU13P55769 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.1□□□□□ -0.31
SNU13P55769 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNU13P55769 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNU13P55769 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.1□□□□□ -0.31
SNU13P55769 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.1□□□□□ -0.31
SNU13P55769 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
SNU13P55769 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.1□□□□□ -0.31
SNU13P55769 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms