Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.44□□□□□ -0.1
NR1H2P55055 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NR1H2P55055 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NR1H2P55055 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.44□□□□□ -0.1
NR1H2P55055 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NR1H2P55055 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NR1H2P55055 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.44□□□□□ -0.1
NR1H2P55055 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.44□□□□□ -0.1
NR1H2P55055 AC134407.2-201ENST00000625089 1978 ntBASIC14.43□□□□□ -0.1
NR1H2P55055 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.43□□□□□ -0.1
NR1H2P55055 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NR1H2P55055 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NR1H2P55055 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NR1H2P55055 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
NR1H2P55055 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.43□□□□□ -0.1
NR1H2P55055 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
NR1H2P55055 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NR1H2P55055 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NR1H2P55055 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NR1H2P55055 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.43□□□□□ -0.1
NR1H2P55055 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.43□□□□□ -0.1
NR1H2P55055 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.43□□□□□ -0.1
NR1H2P55055 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 AC093214.1-201ENST00000511688 1107 ntBASIC14.43□□□□□ -0.1
NR1H2P55055 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.43□□□□□ -0.1
NR1H2P55055 DUX4L27-201ENST00000554796 1261 ntBASIC14.43□□□□□ -0.1
NR1H2P55055 AC026150.2-201ENST00000564693 1156 ntBASIC14.43□□□□□ -0.1
NR1H2P55055 AC140878.1-201ENST00000565277 250 ntBASIC14.43□□□□□ -0.1
NR1H2P55055 AP000842.3-202ENST00000569238 1080 ntBASIC14.43□□□□□ -0.1
NR1H2P55055 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NR1H2P55055 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.43□□□□□ -0.1
NR1H2P55055 AC138761.1-201ENST00000584393 385 ntBASIC14.43□□□□□ -0.1
NR1H2P55055 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.43□□□□□ -0.1
NR1H2P55055 AL365330.1-201ENST00000607459 531 ntBASIC14.43□□□□□ -0.1
NR1H2P55055 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.43□□□□□ -0.1
NR1H2P55055 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.43□□□□□ -0.1
NR1H2P55055 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.43□□□□□ -0.1
NR1H2P55055 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NR1H2P55055 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.43□□□□□ -0.1
NR1H2P55055 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NR1H2P55055 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NR1H2P55055 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H2P55055 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H2P55055 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H2P55055 AL139385.1-201ENST00000611744 3272 ntBASIC14.42□□□□□ -0.1
NR1H2P55055 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H2P55055 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NR1H2P55055 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NR1H2P55055 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.42□□□□□ -0.1
NR1H2P55055 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
NR1H2P55055 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NR1H2P55055 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.42□□□□□ -0.1
NR1H2P55055 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NR1H2P55055 MIR943-201ENST00000401286 94 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms