Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.34■□□□□ 0.05
HADHAP40939 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.34■□□□□ 0.05
HADHAP40939 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.34■□□□□ 0.05
HADHAP40939 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.34■□□□□ 0.05
HADHAP40939 AC027307.3-201ENST00000594262 1100 ntBASIC15.34■□□□□ 0.05
HADHAP40939 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HADHAP40939 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.34■□□□□ 0.05
HADHAP40939 AC239800.4-201ENST00000603712 296 ntBASIC15.34■□□□□ 0.05
HADHAP40939 AC133539.2-201ENST00000604757 467 ntBASIC15.34■□□□□ 0.05
HADHAP40939 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HADHAP40939 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
HADHAP40939 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 AC093525.8-201ENST00000624099 1342 ntBASIC15.34■□□□□ 0.05
HADHAP40939 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.34■□□□□ 0.05
HADHAP40939 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HADHAP40939 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
HADHAP40939 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HADHAP40939 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HADHAP40939 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HADHAP40939 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HADHAP40939 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HADHAP40939 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HADHAP40939 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HADHAP40939 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.33■□□□□ 0.05
HADHAP40939 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.33■□□□□ 0.05
HADHAP40939 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.33■□□□□ 0.04
HADHAP40939 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.33■□□□□ 0.04
HADHAP40939 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.33■□□□□ 0.04
HADHAP40939 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHAP40939 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHAP40939 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HADHAP40939 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHAP40939 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHAP40939 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HADHAP40939 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.33■□□□□ 0.04
HADHAP40939 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.33■□□□□ 0.04
HADHAP40939 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
HADHAP40939 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.33■□□□□ 0.04
HADHAP40939 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HADHAP40939 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.33■□□□□ 0.04
HADHAP40939 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
HADHAP40939 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.33■□□□□ 0.04
HADHAP40939 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.33■□□□□ 0.04
HADHAP40939 CHCHD2P3-201ENST00000603038 451 ntBASIC15.33■□□□□ 0.04
HADHAP40939 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.33■□□□□ 0.04
HADHAP40939 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.33■□□□□ 0.04
HADHAP40939 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HADHAP40939 AC105233.6-201ENST00000642093 218 ntBASIC15.33■□□□□ 0.04
HADHAP40939 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HADHAP40939 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHAP40939 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHAP40939 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHAP40939 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHAP40939 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHAP40939 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.33■□□□□ 0.04
HADHAP40939 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHAP40939 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HADHAP40939 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.32■□□□□ 0.04
HADHAP40939 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HADHAP40939 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.32■□□□□ 0.04
HADHAP40939 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HADHAP40939 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.32■□□□□ 0.04
HADHAP40939 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.32■□□□□ 0.04
HADHAP40939 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.32■□□□□ 0.04
HADHAP40939 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.32■□□□□ 0.04
HADHAP40939 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.32■□□□□ 0.04
HADHAP40939 BX539320.1-201ENST00000623759 877 ntBASIC15.32■□□□□ 0.04
HADHAP40939 AL358472.5-202ENST00000641448 1267 ntBASIC15.32■□□□□ 0.04
HADHAP40939 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HADHAP40939 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HADHAP40939 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHAP40939 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms