Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
KRT20P35900 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT20P35900 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KRT20P35900 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KRT20P35900 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.47□□□□□ -0.09
KRT20P35900 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.47□□□□□ -0.09
KRT20P35900 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT20P35900 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KRT20P35900 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT20P35900 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT20P35900 ZBED1P1-201ENST00000502364 1930 ntBASIC14.47□□□□□ -0.09
KRT20P35900 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
KRT20P35900 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT20P35900 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
KRT20P35900 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
KRT20P35900 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT20P35900 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.46□□□□□ -0.09
KRT20P35900 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.46□□□□□ -0.09
KRT20P35900 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
KRT20P35900 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
KRT20P35900 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 MRPS18AP1-201ENST00000414458 589 ntBASIC14.46□□□□□ -0.09
KRT20P35900 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT20P35900 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.46□□□□□ -0.09
KRT20P35900 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT20P35900 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT20P35900 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.46□□□□□ -0.09
KRT20P35900 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.46□□□□□ -0.09
KRT20P35900 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
KRT20P35900 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT20P35900 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT20P35900 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT20P35900 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.46□□□□□ -0.1
KRT20P35900 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
KRT20P35900 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
KRT20P35900 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
KRT20P35900 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
KRT20P35900 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
KRT20P35900 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.46□□□□□ -0.1
KRT20P35900 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
KRT20P35900 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.46□□□□□ -0.1
KRT20P35900 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KRT20P35900 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KRT20P35900 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KRT20P35900 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KRT20P35900 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KRT20P35900 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
KRT20P35900 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
KRT20P35900 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 SPDYE19P-201ENST00000338590 713 ntBASIC14.45□□□□□ -0.1
KRT20P35900 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.45□□□□□ -0.1
KRT20P35900 TOMM22P5-201ENST00000416399 439 ntBASIC14.45□□□□□ -0.1
KRT20P35900 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KRT20P35900 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.45□□□□□ -0.1
KRT20P35900 FAM207CP-201ENST00000443486 507 ntBASIC14.45□□□□□ -0.1
KRT20P35900 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
KRT20P35900 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.45□□□□□ -0.1
KRT20P35900 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.45□□□□□ -0.1
KRT20P35900 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.45□□□□□ -0.1
KRT20P35900 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 AC036164.1-201ENST00000570544 333 ntBASIC14.45□□□□□ -0.1
KRT20P35900 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.45□□□□□ -0.1
KRT20P35900 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.45□□□□□ -0.1
KRT20P35900 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRT20P35900 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.45□□□□□ -0.1
KRT20P35900 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms