Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCND1P24385 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.31■□□□□ 0.04
CCND1P24385 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 TREML5P-201ENST00000421694 576 ntBASIC15.31■□□□□ 0.04
CCND1P24385 PMS2P2-201ENST00000425039 1128 ntBASIC15.31■□□□□ 0.04
CCND1P24385 AC241585.1-201ENST00000433527 519 ntBASIC15.31■□□□□ 0.04
CCND1P24385 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.31■□□□□ 0.04
CCND1P24385 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CCND1P24385 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.31■□□□□ 0.04
CCND1P24385 SDHAP3-202ENST00000515467 728 ntBASIC15.31■□□□□ 0.04
CCND1P24385 IGHV3-42-201ENST00000520410 361 ntBASIC15.31■□□□□ 0.04
CCND1P24385 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.31■□□□□ 0.04
CCND1P24385 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.31■□□□□ 0.04
CCND1P24385 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CCND1P24385 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.31■□□□□ 0.04
CCND1P24385 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.31■□□□□ 0.04
CCND1P24385 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCND1P24385 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.31■□□□□ 0.04
CCND1P24385 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.31■□□□□ 0.04
CCND1P24385 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCND1P24385 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.31■□□□□ 0.04
CCND1P24385 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CCND1P24385 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.31■□□□□ 0.04
CCND1P24385 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.31■□□□□ 0.04
CCND1P24385 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCND1P24385 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.31■□□□□ 0.04
CCND1P24385 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CCND1P24385 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CCND1P24385 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CCND1P24385 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.3■□□□□ 0.04
CCND1P24385 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.3■□□□□ 0.04
CCND1P24385 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.3■□□□□ 0.04
CCND1P24385 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 AC092580.3-201ENST00000430932 139 ntBASIC15.3■□□□□ 0.04
CCND1P24385 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.3■□□□□ 0.04
CCND1P24385 MST1P2-201ENST00000457982 2291 ntBASIC15.3■□□□□ 0.04
CCND1P24385 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.3■□□□□ 0.04
CCND1P24385 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.3■□□□□ 0.04
CCND1P24385 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CCND1P24385 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.3■□□□□ 0.04
CCND1P24385 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CCND1P24385 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCND1P24385 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.3■□□□□ 0.04
CCND1P24385 AC010336.2-201ENST00000564226 506 ntBASIC15.3■□□□□ 0.04
CCND1P24385 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.3■□□□□ 0.04
CCND1P24385 AC005562.1-201ENST00000583030 3219 ntBASIC15.3■□□□□ 0.04
CCND1P24385 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.3■□□□□ 0.04
CCND1P24385 AC074044.1-201ENST00000609673 707 ntBASIC15.3■□□□□ 0.04
CCND1P24385 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.3■□□□□ 0.04
CCND1P24385 AC100757.3-201ENST00000622361 1406 ntBASIC15.3■□□□□ 0.04
CCND1P24385 AL607033.1-201ENST00000623900 1599 ntBASIC15.3■□□□□ 0.04
CCND1P24385 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.3■□□□□ 0.04
CCND1P24385 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CCND1P24385 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCND1P24385 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCND1P24385 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCND1P24385 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.3■□□□□ 0.04
CCND1P24385 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.29■□□□□ 0.04
CCND1P24385 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.29■□□□□ 0.04
CCND1P24385 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.29■□□□□ 0.04
CCND1P24385 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms