Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYN1P17600 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SYN1P17600 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.18■□□□□ 0.18
SYN1P17600 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYN1P17600 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYN1P17600 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.18■□□□□ 0.18
SYN1P17600 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYN1P17600 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYN1P17600 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYN1P17600 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.18■□□□□ 0.18
SYN1P17600 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.18■□□□□ 0.18
SYN1P17600 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYN1P17600 AC092364.2-201ENST00000596710 2692 ntBASIC16.18■□□□□ 0.18
SYN1P17600 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYN1P17600 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.18■□□□□ 0.18
SYN1P17600 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYN1P17600 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.18■□□□□ 0.18
SYN1P17600 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.18■□□□□ 0.18
SYN1P17600 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYN1P17600 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.18■□□□□ 0.18
SYN1P17600 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.17■□□□□ 0.18
SYN1P17600 MARK2P16-201ENST00000605714 1723 ntBASIC16.17■□□□□ 0.18
SYN1P17600 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SYN1P17600 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SYN1P17600 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SYN1P17600 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SYN1P17600 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 RN7SKP109-201ENST00000410592 316 ntBASIC16.17■□□□□ 0.18
SYN1P17600 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.17■□□□□ 0.18
SYN1P17600 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 AP005212.2-201ENST00000584979 510 ntBASIC16.17■□□□□ 0.18
SYN1P17600 FTLP5-201ENST00000586853 534 ntBASIC16.17■□□□□ 0.18
SYN1P17600 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.17■□□□□ 0.18
SYN1P17600 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.17■□□□□ 0.18
SYN1P17600 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.17■□□□□ 0.18
SYN1P17600 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SYN1P17600 AL138725.1-201ENST00000407347 1314 ntBASIC16.17■□□□□ 0.18
SYN1P17600 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYN1P17600 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SYN1P17600 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYN1P17600 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.16■□□□□ 0.18
SYN1P17600 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.16■□□□□ 0.18
SYN1P17600 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.16■□□□□ 0.18
SYN1P17600 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYN1P17600 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYN1P17600 AL662844.4-201ENST00000606367 2838 ntBASIC16.16■□□□□ 0.18
SYN1P17600 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYN1P17600 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYN1P17600 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.16■□□□□ 0.18
SYN1P17600 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYN1P17600 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYN1P17600 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SYN1P17600 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYN1P17600 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.16■□□□□ 0.18
SYN1P17600 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.16■□□□□ 0.18
SYN1P17600 IGHEP1-201ENST00000521393 651 ntBASIC16.16■□□□□ 0.18
SYN1P17600 ABHD17AP9-201ENST00000561925 548 ntBASIC16.16■□□□□ 0.18
SYN1P17600 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SYN1P17600 AC006548.2-201ENST00000605217 529 ntBASIC16.16■□□□□ 0.18
SYN1P17600 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.16■□□□□ 0.18
SYN1P17600 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SYN1P17600 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.16■□□□□ 0.18
SYN1P17600 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.16■□□□□ 0.18
SYN1P17600 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.16■□□□□ 0.18
SYN1P17600 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYN1P17600 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SYN1P17600 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.16■□□□□ 0.18
SYN1P17600 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYN1P17600 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYN1P17600 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYN1P17600 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SYN1P17600 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYN1P17600 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.16■□□□□ 0.18
SYN1P17600 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SYN1P17600 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYN1P17600 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.15■□□□□ 0.18
SYN1P17600 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SYN1P17600 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.15■□□□□ 0.18
SYN1P17600 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYN1P17600 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms