Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.24□□□□□ -0.29
SFTPBP07988 AC002472.2-201ENST00000442739 958 ntBASIC13.24□□□□□ -0.29
SFTPBP07988 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.24□□□□□ -0.29
SFTPBP07988 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.24□□□□□ -0.29
SFTPBP07988 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.24□□□□□ -0.29
SFTPBP07988 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.24□□□□□ -0.29
SFTPBP07988 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.24□□□□□ -0.29
SFTPBP07988 AC138761.1-201ENST00000584393 385 ntBASIC13.24□□□□□ -0.29
SFTPBP07988 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.24□□□□□ -0.29
SFTPBP07988 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.24□□□□□ -0.29
SFTPBP07988 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.24□□□□□ -0.29
SFTPBP07988 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.24□□□□□ -0.29
SFTPBP07988 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 AC005912.2-201ENST00000619492 2400 ntBASIC13.24□□□□□ -0.29
SFTPBP07988 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 AC015656.1-201ENST00000624209 3578 ntBASIC13.24□□□□□ -0.29
SFTPBP07988 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SFTPBP07988 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.24□□□□□ -0.29
SFTPBP07988 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SFTPBP07988 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.24□□□□□ -0.29
SFTPBP07988 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.24□□□□□ -0.29
SFTPBP07988 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 AC022144.1-201ENST00000602255 1580 ntBASIC13.24□□□□□ -0.29
SFTPBP07988 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SFTPBP07988 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SFTPBP07988 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 AJ011931.1-201ENST00000618749 2492 ntBASIC13.23□□□□□ -0.29
SFTPBP07988 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.23□□□□□ -0.29
SFTPBP07988 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.23□□□□□ -0.29
SFTPBP07988 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SFTPBP07988 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.23□□□□□ -0.29
SFTPBP07988 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
SFTPBP07988 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SFTPBP07988 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.23□□□□□ -0.29
SFTPBP07988 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SFTPBP07988 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.23□□□□□ -0.29
SFTPBP07988 KRT18P64-201ENST00000434946 1219 ntBASIC13.23□□□□□ -0.29
SFTPBP07988 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.23□□□□□ -0.29
SFTPBP07988 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.23□□□□□ -0.29
SFTPBP07988 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.23□□□□□ -0.29
SFTPBP07988 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.23□□□□□ -0.29
SFTPBP07988 SLED1-202ENST00000512051 380 ntBASIC13.23□□□□□ -0.29
SFTPBP07988 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.23□□□□□ -0.29
SFTPBP07988 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.23□□□□□ -0.29
SFTPBP07988 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.23□□□□□ -0.29
SFTPBP07988 AL033527.5-202ENST00000641632 1098 ntBASIC13.23□□□□□ -0.29
SFTPBP07988 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.23□□□□□ -0.29
SFTPBP07988 FGD5P1-202ENST00000614866 2498 ntBASIC13.23□□□□□ -0.29
SFTPBP07988 INTS4P1-203ENST00000641008 3683 ntBASIC13.23□□□□□ -0.29
SFTPBP07988 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 Z97205.2-201ENST00000564697 1639 ntBASIC13.23□□□□□ -0.29
SFTPBP07988 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SFTPBP07988 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.23□□□□□ -0.29
SFTPBP07988 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SFTPBP07988 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms