Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 GNRHR2-203ENST00000581100 1187 ntBASIC11.7□□□□□ -0.54
TRBV12-3P01733 AC004466.1-201ENST00000599515 1080 ntBASIC11.7□□□□□ -0.54
TRBV12-3P01733 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 MIR600HG-201ENST00000449175 5984 ntBASIC11.7□□□□□ -0.54
TRBV12-3P01733 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 AC092933.1-201ENST00000393644 945 ntBASIC11.69□□□□□ -0.54
TRBV12-3P01733 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 FTH1P14-201ENST00000482930 551 ntBASIC11.69□□□□□ -0.54
TRBV12-3P01733 DUX4L47-201ENST00000566374 394 ntBASIC11.69□□□□□ -0.54
TRBV12-3P01733 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 AL022328.1-201ENST00000610050 478 ntBASIC11.69□□□□□ -0.54
TRBV12-3P01733 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 AC244669.2-201ENST00000612320 853 ntBASIC11.69□□□□□ -0.54
TRBV12-3P01733 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 AC023090.2-201ENST00000625182 2110 ntBASIC11.69□□□□□ -0.54
TRBV12-3P01733 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRBV12-3P01733 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.69□□□□□ -0.54
TRBV12-3P01733 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 AL138709.1-201ENST00000614840 1693 ntBASIC11.68□□□□□ -0.54
TRBV12-3P01733 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 AC106881.1-201ENST00000605849 3329 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms