Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.91□□□□□ -0.18
NKX2-2O95096 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-2O95096 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-2O95096 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-2O95096 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-2O95096 POM121L9P-203ENST00000441984 1285 ntBASIC13.91□□□□□ -0.18
NKX2-2O95096 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-2O95096 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.91□□□□□ -0.18
NKX2-2O95096 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.91□□□□□ -0.18
NKX2-2O95096 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-2O95096 MESTP3-201ENST00000503460 968 ntBASIC13.91□□□□□ -0.18
NKX2-2O95096 USP32P1-208ENST00000506594 1164 ntBASIC13.91□□□□□ -0.18
NKX2-2O95096 AC106760.1-201ENST00000508690 800 ntBASIC13.91□□□□□ -0.18
NKX2-2O95096 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NKX2-2O95096 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.91□□□□□ -0.18
NKX2-2O95096 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.91□□□□□ -0.18
NKX2-2O95096 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NKX2-2O95096 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.91□□□□□ -0.18
NKX2-2O95096 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-2O95096 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
NKX2-2O95096 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-2O95096 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NKX2-2O95096 ENPP7P14-201ENST00000621765 1040 ntBASIC13.91□□□□□ -0.18
NKX2-2O95096 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-2O95096 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-2O95096 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-2O95096 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-2O95096 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-2O95096 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-2O95096 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-2O95096 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-2O95096 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
NKX2-2O95096 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.91□□□□□ -0.18
NKX2-2O95096 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NKX2-2O95096 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NKX2-2O95096 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-2O95096 SALL4P5-201ENST00000419001 1760 ntBASIC13.91□□□□□ -0.18
NKX2-2O95096 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-2O95096 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-2O95096 AC007686.3-201ENST00000619017 3487 ntBASIC13.91□□□□□ -0.18
NKX2-2O95096 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-2O95096 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-2O95096 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NKX2-2O95096 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 AL138725.1-201ENST00000407347 1314 ntBASIC13.9□□□□□ -0.18
NKX2-2O95096 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NKX2-2O95096 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NKX2-2O95096 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NKX2-2O95096 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX2-2O95096 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX2-2O95096 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX2-2O95096 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NKX2-2O95096 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
NKX2-2O95096 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX2-2O95096 AL512384.1-201ENST00000406683 331 ntBASIC13.9□□□□□ -0.18
NKX2-2O95096 COX5BP8-201ENST00000416911 349 ntBASIC13.9□□□□□ -0.18
NKX2-2O95096 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NKX2-2O95096 SLC25A47P1-201ENST00000531577 414 ntBASIC13.9□□□□□ -0.18
NKX2-2O95096 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.9□□□□□ -0.18
NKX2-2O95096 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX2-2O95096 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX2-2O95096 GNRHR2-203ENST00000581100 1187 ntBASIC13.9□□□□□ -0.18
NKX2-2O95096 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.9□□□□□ -0.18
NKX2-2O95096 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX2-2O95096 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX2-2O95096 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX2-2O95096 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NKX2-2O95096 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-2O95096 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX2-2O95096 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX2-2O95096 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
NKX2-2O95096 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
NKX2-2O95096 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NKX2-2O95096 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-2O95096 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NKX2-2O95096 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-2O95096 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
NKX2-2O95096 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NKX2-2O95096 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms