Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.39□□□□□ -0.27
KDM4BO94953 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.39□□□□□ -0.27
KDM4BO94953 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
KDM4BO94953 AL139385.1-201ENST00000611744 3272 ntBASIC13.38□□□□□ -0.27
KDM4BO94953 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.38□□□□□ -0.27
KDM4BO94953 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
KDM4BO94953 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
KDM4BO94953 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.38□□□□□ -0.27
KDM4BO94953 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.38□□□□□ -0.27
KDM4BO94953 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
KDM4BO94953 AL035456.1-201ENST00000456064 1369 ntBASIC13.38□□□□□ -0.27
KDM4BO94953 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.38□□□□□ -0.27
KDM4BO94953 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
KDM4BO94953 RBPMS2P1-201ENST00000437762 623 ntBASIC13.38□□□□□ -0.27
KDM4BO94953 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.38□□□□□ -0.27
KDM4BO94953 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 SPDYE14P-201ENST00000442619 822 ntBASIC13.38□□□□□ -0.27
KDM4BO94953 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.38□□□□□ -0.27
KDM4BO94953 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.38□□□□□ -0.27
KDM4BO94953 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.38□□□□□ -0.27
KDM4BO94953 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.38□□□□□ -0.27
KDM4BO94953 MIR3687-2-201ENST00000577708 61 ntBASIC13.38□□□□□ -0.27
KDM4BO94953 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
KDM4BO94953 AC004835.2-201ENST00000603762 682 ntBASIC13.38□□□□□ -0.27
KDM4BO94953 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.38□□□□□ -0.27
KDM4BO94953 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.38□□□□□ -0.27
KDM4BO94953 AC003101.2-201ENST00000612557 442 ntBASIC13.38□□□□□ -0.27
KDM4BO94953 MIR3687-1-201ENST00000614492 61 ntBASIC13.38□□□□□ -0.27
KDM4BO94953 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.38□□□□□ -0.27
KDM4BO94953 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.38□□□□□ -0.27
KDM4BO94953 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
KDM4BO94953 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
KDM4BO94953 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.38□□□□□ -0.27
KDM4BO94953 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.38□□□□□ -0.27
KDM4BO94953 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.38□□□□□ -0.27
KDM4BO94953 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.38□□□□□ -0.27
KDM4BO94953 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
KDM4BO94953 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
KDM4BO94953 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.38□□□□□ -0.27
KDM4BO94953 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KDM4BO94953 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 AL356585.2-201ENST00000625078 2396 ntBASIC13.37□□□□□ -0.27
KDM4BO94953 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 Z82170.1-201ENST00000625081 3192 ntBASIC13.37□□□□□ -0.27
KDM4BO94953 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.37□□□□□ -0.27
KDM4BO94953 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 DGCR9-201ENST00000609630 2415 ntBASIC13.37□□□□□ -0.27
KDM4BO94953 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.37□□□□□ -0.27
KDM4BO94953 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.37□□□□□ -0.27
KDM4BO94953 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.37□□□□□ -0.27
KDM4BO94953 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.37□□□□□ -0.27
KDM4BO94953 AP000347.1-202ENST00000435868 847 ntBASIC13.37□□□□□ -0.27
KDM4BO94953 HIST3H2BA-201ENST00000436555 524 ntBASIC13.37□□□□□ -0.27
KDM4BO94953 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.37□□□□□ -0.27
KDM4BO94953 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.37□□□□□ -0.27
KDM4BO94953 AC026150.2-201ENST00000564693 1156 ntBASIC13.37□□□□□ -0.27
KDM4BO94953 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.37□□□□□ -0.27
KDM4BO94953 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
KDM4BO94953 AL133215.2-201ENST00000609242 977 ntBASIC13.37□□□□□ -0.27
KDM4BO94953 AC009093.7-201ENST00000623853 1223 ntBASIC13.37□□□□□ -0.27
KDM4BO94953 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.37□□□□□ -0.27
KDM4BO94953 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.37□□□□□ -0.27
KDM4BO94953 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KDM4BO94953 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms