Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CCNKO75909 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.14□□□□□ -0.31
CCNKO75909 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCNKO75909 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCNKO75909 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCNKO75909 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCNKO75909 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCNKO75909 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCNKO75909 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CCNKO75909 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCNKO75909 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCNKO75909 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.14□□□□□ -0.31
CCNKO75909 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCNKO75909 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CCNKO75909 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CCNKO75909 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCNKO75909 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCNKO75909 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCNKO75909 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCNKO75909 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.14□□□□□ -0.31
CCNKO75909 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCNKO75909 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCNKO75909 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCNKO75909 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CCNKO75909 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.13□□□□□ -0.31
CCNKO75909 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
CCNKO75909 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCNKO75909 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.13□□□□□ -0.31
CCNKO75909 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCNKO75909 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCNKO75909 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.13□□□□□ -0.31
CCNKO75909 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.13□□□□□ -0.31
CCNKO75909 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.13□□□□□ -0.31
CCNKO75909 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.13□□□□□ -0.31
CCNKO75909 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.13□□□□□ -0.31
CCNKO75909 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCNKO75909 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.13□□□□□ -0.31
CCNKO75909 DRAXINP1-201ENST00000437611 948 ntBASIC13.13□□□□□ -0.31
CCNKO75909 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.13□□□□□ -0.31
CCNKO75909 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CCNKO75909 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.13□□□□□ -0.31
CCNKO75909 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.13□□□□□ -0.31
CCNKO75909 AP002414.4-201ENST00000589764 1148 ntBASIC13.13□□□□□ -0.31
CCNKO75909 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.13□□□□□ -0.31
CCNKO75909 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CCNKO75909 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCNKO75909 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCNKO75909 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.13□□□□□ -0.31
CCNKO75909 AC005332.1-201ENST00000577698 1310 ntBASIC13.13□□□□□ -0.31
CCNKO75909 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CCNKO75909 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.12□□□□□ -0.31
CCNKO75909 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.12□□□□□ -0.31
CCNKO75909 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.12□□□□□ -0.31
CCNKO75909 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.12□□□□□ -0.31
CCNKO75909 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCNKO75909 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms