Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.18□□□□□ -0.14
TRIM3O75382 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.18□□□□□ -0.14
TRIM3O75382 ENPP7P5-201ENST00000541031 1031 ntBASIC14.18□□□□□ -0.14
TRIM3O75382 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.18□□□□□ -0.14
TRIM3O75382 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.18□□□□□ -0.14
TRIM3O75382 RPSAP52-203ENST00000622976 1023 ntBASIC14.18□□□□□ -0.14
TRIM3O75382 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM3O75382 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRIM3O75382 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRIM3O75382 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 LINC00552-201ENST00000625151 2579 ntBASIC14.18□□□□□ -0.14
TRIM3O75382 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM3O75382 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
TRIM3O75382 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM3O75382 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRIM3O75382 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRIM3O75382 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM3O75382 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM3O75382 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM3O75382 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TRIM3O75382 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM3O75382 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM3O75382 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 C1QBPP1-201ENST00000400117 770 ntBASIC14.17□□□□□ -0.14
TRIM3O75382 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM3O75382 SOCS2P1-201ENST00000417727 557 ntBASIC14.17□□□□□ -0.14
TRIM3O75382 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 AC007389.4-201ENST00000454674 793 ntBASIC14.17□□□□□ -0.14
TRIM3O75382 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM3O75382 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.17□□□□□ -0.14
TRIM3O75382 GAPDHP40-201ENST00000505218 1006 ntBASIC14.17□□□□□ -0.14
TRIM3O75382 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.17□□□□□ -0.14
TRIM3O75382 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM3O75382 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM3O75382 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TRIM3O75382 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM3O75382 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM3O75382 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM3O75382 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRIM3O75382 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM3O75382 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM3O75382 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 CU634019.7-201ENST00000624153 1185 ntBASIC14.17□□□□□ -0.14
TRIM3O75382 FP236241.2-201ENST00000624906 1185 ntBASIC14.17□□□□□ -0.14
TRIM3O75382 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.17□□□□□ -0.14
TRIM3O75382 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
TRIM3O75382 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRIM3O75382 AC041040.2-201ENST00000622926 2899 ntBASIC14.17□□□□□ -0.14
TRIM3O75382 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM3O75382 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRIM3O75382 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 BEND3P1-201ENST00000421591 1944 ntBASIC14.17□□□□□ -0.14
TRIM3O75382 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRIM3O75382 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM3O75382 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM3O75382 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM3O75382 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
TRIM3O75382 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRIM3O75382 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRIM3O75382 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRIM3O75382 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 ST20-AS1-201ENST00000560255 4223 ntBASIC14.16□□□□□ -0.14
TRIM3O75382 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRIM3O75382 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRIM3O75382 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms