Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.95■□□□□ 0.3
ACTN4O43707 AL161772.1-201ENST00000610494 4412 ntBASIC16.95■□□□□ 0.3
ACTN4O43707 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.95■□□□□ 0.3
ACTN4O43707 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.95■□□□□ 0.3
ACTN4O43707 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
ACTN4O43707 TPT1P11-201ENST00000458482 498 ntBASIC16.95■□□□□ 0.3
ACTN4O43707 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.95■□□□□ 0.3
ACTN4O43707 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ACTN4O43707 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 AC026434.2-201ENST00000506094 1078 ntBASIC16.95■□□□□ 0.3
ACTN4O43707 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.95■□□□□ 0.3
ACTN4O43707 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.95■□□□□ 0.3
ACTN4O43707 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.95■□□□□ 0.3
ACTN4O43707 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ACTN4O43707 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ACTN4O43707 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.95■□□□□ 0.3
ACTN4O43707 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
ACTN4O43707 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ACTN4O43707 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.95■□□□□ 0.3
ACTN4O43707 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ACTN4O43707 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ACTN4O43707 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.94■□□□□ 0.3
ACTN4O43707 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
ACTN4O43707 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
ACTN4O43707 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.94■□□□□ 0.3
ACTN4O43707 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 GRK6P1-201ENST00000400595 1711 ntBASIC16.94■□□□□ 0.3
ACTN4O43707 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ACTN4O43707 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.94■□□□□ 0.3
ACTN4O43707 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.94■□□□□ 0.3
ACTN4O43707 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.94■□□□□ 0.3
ACTN4O43707 AP001582.1-201ENST00000525856 295 ntBASIC16.94■□□□□ 0.3
ACTN4O43707 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.94■□□□□ 0.3
ACTN4O43707 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.94■□□□□ 0.3
ACTN4O43707 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.94■□□□□ 0.3
ACTN4O43707 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.94■□□□□ 0.3
ACTN4O43707 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.94■□□□□ 0.3
ACTN4O43707 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.94■□□□□ 0.3
ACTN4O43707 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.94■□□□□ 0.3
ACTN4O43707 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.94■□□□□ 0.3
ACTN4O43707 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
ACTN4O43707 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ACTN4O43707 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.94■□□□□ 0.3
ACTN4O43707 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ACTN4O43707 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ACTN4O43707 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ACTN4O43707 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ACTN4O43707 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.93■□□□□ 0.3
ACTN4O43707 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
ACTN4O43707 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.93■□□□□ 0.3
ACTN4O43707 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.93■□□□□ 0.3
ACTN4O43707 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.93■□□□□ 0.3
ACTN4O43707 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTN4O43707 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms