Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PAX4O43316 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PAX4O43316 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PAX4O43316 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC10.91□□□□□ -0.66
PAX4O43316 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PAX4O43316 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PAX4O43316 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PAX4O43316 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC10.91□□□□□ -0.66
PAX4O43316 STK33-217ENST00000534493 1895 ntTSL 2 BASIC10.91□□□□□ -0.66
PAX4O43316 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PAX4O43316 AC023157.3-201ENST00000619086 2088 ntBASIC10.91□□□□□ -0.66
PAX4O43316 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
PAX4O43316 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PAX4O43316 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PAX4O43316 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PAX4O43316 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
PAX4O43316 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
PAX4O43316 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PAX4O43316 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
PAX4O43316 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
PAX4O43316 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
PAX4O43316 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.9□□□□□ -0.66
PAX4O43316 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
PAX4O43316 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 AC138035.3-201ENST00000622706 2791 ntBASIC10.9□□□□□ -0.66
PAX4O43316 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
PAX4O43316 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 AC007541.1-201ENST00000570282 1469 ntBASIC10.9□□□□□ -0.66
PAX4O43316 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
PAX4O43316 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 FAM86LP-201ENST00000478302 853 ntBASIC10.9□□□□□ -0.66
PAX4O43316 SERBP1P5-201ENST00000510079 1181 ntBASIC10.9□□□□□ -0.66
PAX4O43316 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC10.9□□□□□ -0.66
PAX4O43316 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC10.9□□□□□ -0.66
PAX4O43316 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 AC023310.3-201ENST00000557027 670 ntBASIC10.9□□□□□ -0.66
PAX4O43316 AC100756.1-201ENST00000562736 682 ntBASIC10.9□□□□□ -0.66
PAX4O43316 AC138749.3-201ENST00000567691 622 ntBASIC10.9□□□□□ -0.66
PAX4O43316 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 ARL16-202ENST00000570561 768 ntTSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC10.9□□□□□ -0.66
PAX4O43316 MIR4745-201ENST00000577608 62 ntBASIC10.9□□□□□ -0.66
PAX4O43316 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC10.9□□□□□ -0.66
PAX4O43316 LINC02560-201ENST00000596379 459 ntBASIC10.9□□□□□ -0.66
PAX4O43316 AC025181.2-201ENST00000606994 802 ntBASIC10.9□□□□□ -0.66
PAX4O43316 AC116165.1-201ENST00000611806 668 ntBASIC10.9□□□□□ -0.66
PAX4O43316 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC10.9□□□□□ -0.66
PAX4O43316 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 HFE2-206ENST00000634927 506 ntTSL 4 BASIC10.9□□□□□ -0.66
PAX4O43316 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
PAX4O43316 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
PAX4O43316 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC10.9□□□□□ -0.66
PAX4O43316 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
PAX4O43316 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.9□□□□□ -0.66
PAX4O43316 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PAX4O43316 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC10.9□□□□□ -0.66
PAX4O43316 AC112693.3-201ENST00000624819 1983 ntBASIC10.9□□□□□ -0.66
PAX4O43316 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC10.9□□□□□ -0.67
PAX4O43316 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
PAX4O43316 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
PAX4O43316 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms