Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
NDUFA1O15239 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC10.4□□□□□ -0.74
NDUFA1O15239 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.4□□□□□ -0.74
NDUFA1O15239 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
NDUFA1O15239 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
NDUFA1O15239 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
NDUFA1O15239 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC10.4□□□□□ -0.74
NDUFA1O15239 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC10.4□□□□□ -0.74
NDUFA1O15239 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
NDUFA1O15239 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
NDUFA1O15239 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC10.4□□□□□ -0.74
NDUFA1O15239 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
NDUFA1O15239 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
NDUFA1O15239 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
NDUFA1O15239 MIR940-201ENST00000401276 94 ntBASIC10.4□□□□□ -0.74
NDUFA1O15239 AC136604.1-201ENST00000418535 575 ntBASIC10.4□□□□□ -0.74
NDUFA1O15239 MCCD1P2-201ENST00000423228 335 ntBASIC10.4□□□□□ -0.74
NDUFA1O15239 ADH5P3-201ENST00000433842 1137 ntBASIC10.4□□□□□ -0.74
NDUFA1O15239 MKNK2P1-201ENST00000437526 628 ntBASIC10.4□□□□□ -0.74
NDUFA1O15239 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC10.4□□□□□ -0.74
NDUFA1O15239 KRT8P48-201ENST00000515599 1220 ntBASIC10.4□□□□□ -0.74
NDUFA1O15239 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC10.4□□□□□ -0.74
NDUFA1O15239 TSFM-210ENST00000550559 897 ntTSL 5 BASIC10.4□□□□□ -0.74
NDUFA1O15239 RARRES2P9-201ENST00000565168 469 ntBASIC10.4□□□□□ -0.74
NDUFA1O15239 MTDHP5-201ENST00000598980 586 ntBASIC10.4□□□□□ -0.74
NDUFA1O15239 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC10.4□□□□□ -0.74
NDUFA1O15239 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
NDUFA1O15239 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC10.4□□□□□ -0.74
NDUFA1O15239 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 AC023090.2-201ENST00000625182 2110 ntBASIC10.4□□□□□ -0.74
NDUFA1O15239 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
NDUFA1O15239 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
NDUFA1O15239 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
NDUFA1O15239 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
NDUFA1O15239 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC10.4□□□□□ -0.75
NDUFA1O15239 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
NDUFA1O15239 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
NDUFA1O15239 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
NDUFA1O15239 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
NDUFA1O15239 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
NDUFA1O15239 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
NDUFA1O15239 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
NDUFA1O15239 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
NDUFA1O15239 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 AC007787.1-201ENST00000588095 1583 ntBASIC10.39□□□□□ -0.75
NDUFA1O15239 AP3S2-216ENST00000617003 1561 ntBASIC10.39□□□□□ -0.75
NDUFA1O15239 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
NDUFA1O15239 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC10.39□□□□□ -0.75
NDUFA1O15239 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
NDUFA1O15239 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC10.39□□□□□ -0.75
NDUFA1O15239 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
NDUFA1O15239 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC10.39□□□□□ -0.75
NDUFA1O15239 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.39□□□□□ -0.75
NDUFA1O15239 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC10.39□□□□□ -0.75
NDUFA1O15239 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC10.39□□□□□ -0.75
NDUFA1O15239 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
NDUFA1O15239 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NDUFA1O15239 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC10.39□□□□□ -0.75
NDUFA1O15239 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC10.39□□□□□ -0.75
NDUFA1O15239 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC10.39□□□□□ -0.75
NDUFA1O15239 FDX1P1-201ENST00000449115 551 ntBASIC10.39□□□□□ -0.75
NDUFA1O15239 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
NDUFA1O15239 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms