Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA2Q9Y5H1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA2Q9Y5H1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHGA2Q9Y5H1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHGA2Q9Y5H1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.32■■□□□ 1.32
PCDHGA2Q9Y5H1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHGA2Q9Y5H1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDHGA2Q9Y5H1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA2Q9Y5H1 AC005703.6-201ENST00000623265 1329 ntBASIC23.32■■□□□ 1.32
PCDHGA2Q9Y5H1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA2Q9Y5H1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHGA2Q9Y5H1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PCDHGA2Q9Y5H1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHGA2Q9Y5H1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA2Q9Y5H1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA2Q9Y5H1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA2Q9Y5H1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA2Q9Y5H1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 SERBP1P1-201ENST00000396021 1160 ntBASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 AC008764.7-201ENST00000593779 1081 ntBASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 AL138724.1-201ENST00000606771 1088 ntBASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 AL137784.2-201ENST00000607332 1000 ntBASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 AC011298.3-201ENST00000615796 283 ntBASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA2Q9Y5H1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGA2Q9Y5H1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGA2Q9Y5H1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHGA2Q9Y5H1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHGA2Q9Y5H1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.29■■□□□ 1.32
PCDHGA2Q9Y5H1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHGA2Q9Y5H1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHGA2Q9Y5H1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA2Q9Y5H1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
PCDHGA2Q9Y5H1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHGA2Q9Y5H1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA2Q9Y5H1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.28■■□□□ 1.32
PCDHGA2Q9Y5H1 AC034268.1-201ENST00000441047 882 ntBASIC23.28■■□□□ 1.32
PCDHGA2Q9Y5H1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.28■■□□□ 1.32
PCDHGA2Q9Y5H1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHGA2Q9Y5H1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.28■■□□□ 1.32
PCDHGA2Q9Y5H1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
PCDHGA2Q9Y5H1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA2Q9Y5H1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDHGA2Q9Y5H1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHGA2Q9Y5H1 AC099791.1-201ENST00000416440 715 ntBASIC23.27■■□□□ 1.32
PCDHGA2Q9Y5H1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDHGA2Q9Y5H1 AC022517.1-201ENST00000592429 346 ntBASIC23.27■■□□□ 1.32
PCDHGA2Q9Y5H1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA2Q9Y5H1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHGA2Q9Y5H1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA2Q9Y5H1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA2Q9Y5H1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA2Q9Y5H1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHGA2Q9Y5H1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA2Q9Y5H1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA2Q9Y5H1 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.26■■□□□ 1.31
PCDHGA2Q9Y5H1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.26■■□□□ 1.31
PCDHGA2Q9Y5H1 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDHGA2Q9Y5H1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHGA2Q9Y5H1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA2Q9Y5H1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA2Q9Y5H1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHGA2Q9Y5H1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA2Q9Y5H1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHGA2Q9Y5H1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHGA2Q9Y5H1 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.25■■□□□ 1.31
PCDHGA2Q9Y5H1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA2Q9Y5H1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
PCDHGA2Q9Y5H1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHGA2Q9Y5H1 IKBKGP1-201ENST00000612193 1073 ntBASIC23.25■■□□□ 1.31
PCDHGA2Q9Y5H1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA2Q9Y5H1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
PCDHGA2Q9Y5H1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA2Q9Y5H1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHGA2Q9Y5H1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA2Q9Y5H1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDHGA2Q9Y5H1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHGA2Q9Y5H1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHGA2Q9Y5H1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PCDHGA2Q9Y5H1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.23■■□□□ 1.31
PCDHGA2Q9Y5H1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA2Q9Y5H1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA2Q9Y5H1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGA2Q9Y5H1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA2Q9Y5H1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA2Q9Y5H1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGA2Q9Y5H1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PCDHGA2Q9Y5H1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PCDHGA2Q9Y5H1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHGA2Q9Y5H1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms