Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 ARID3A-205ENST00000587532 1016 ntTSL 521.75■■□□□ 1.077e-7■■■□□ 16.9
DDX52Q9Y2R4 ARID3A-202ENST00000457152 549 ntTSL 515.65■□□□□ 0.17e-7■■■□□ 16.9
DDX52Q9Y2R4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.62■□□□□ 0.412e-6■■■□□ 16.9
DDX52Q9Y2R4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.212e-6■■■□□ 16.9
DDX52Q9Y2R4 KDELR2-205ENST00000463747 376 ntTSL 512.49□□□□□ -0.412e-6■■■□□ 16.9
DDX52Q9Y2R4 KDELR2-202ENST00000382267 583 ntTSL 411.75□□□□□ -0.532e-6■■■□□ 16.9
DDX52Q9Y2R4 KDELR2-204ENST00000462052 382 ntTSL 29.42□□□□□ -0.92e-6■■■□□ 16.9
DDX52Q9Y2R4 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.4□□□□□ -1.222e-6■■■□□ 16.9
DDX52Q9Y2R4 DOT1L-203ENST00000452696 624 ntTSL 317.64■□□□□ 0.412e-6■■■□□ 16.9
DDX52Q9Y2R4 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.381e-16■■■□□ 16.8
DDX52Q9Y2R4 SCARNA7-201ENST00000458797 330 ntBASIC12.33□□□□□ -0.441e-16■■■□□ 16.8
DDX52Q9Y2R4 KPNA4-203ENST00000483437 510 ntTSL 54.69□□□□□ -1.661e-16■■■□□ 16.8
DDX52Q9Y2R4 ATP1A1-204ENST00000418797 654 ntTSL 323.67■■□□□ 1.382e-9■■■□□ 16.8
DDX52Q9Y2R4 ATP1A1-208ENST00000488733 1728 ntTSL 223.56■■□□□ 1.362e-9■■■□□ 16.8
DDX52Q9Y2R4 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.082e-9■■■□□ 16.8
DDX52Q9Y2R4 EIF4A1-235ENST00000584860 1109 ntTSL 316.3■□□□□ 0.28e-8■■■□□ 16.8
DDX52Q9Y2R4 ASPSCR1-204ENST00000577733 5503 ntTSL 217.48■□□□□ 0.395e-9■■■□□ 16.6
DDX52Q9Y2R4 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.049e-8■■■□□ 16.6
DDX52Q9Y2R4 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.372e-6■■■□□ 16.6
DDX52Q9Y2R4 APOM-201ENST00000375916 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.561e-7■■■□□ 16.6
DDX52Q9Y2R4 APOM-203ENST00000375920 709 ntTSL 1 (best) BASIC11.57□□□□□ -0.561e-7■■■□□ 16.6
DDX52Q9Y2R4 APOM-202ENST00000375918 922 ntTSL 2 BASIC9.82□□□□□ -0.841e-7■■■□□ 16.6
DDX52Q9Y2R4 PISD-215ENST00000479851 655 ntTSL 323.97■■□□□ 1.431e-6■■■□□ 16.6
DDX52Q9Y2R4 PISD-213ENST00000474017 1760 ntTSL 520.92■□□□□ 0.941e-6■■■□□ 16.6
DDX52Q9Y2R4 PISD-212ENST00000473770 2378 ntTSL 518.44■□□□□ 0.541e-6■■■□□ 16.6
DDX52Q9Y2R4 PISD-205ENST00000429683 609 ntTSL 317.86■□□□□ 0.451e-6■■■□□ 16.6
DDX52Q9Y2R4 PISD-206ENST00000431201 460 ntTSL 417.86■□□□□ 0.451e-6■■■□□ 16.6
DDX52Q9Y2R4 PISD-217ENST00000491342 692 ntTSL 517.8■□□□□ 0.441e-6■■■□□ 16.6
DDX52Q9Y2R4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.281e-6■■■□□ 16.6
DDX52Q9Y2R4 PISD-216ENST00000486675 837 ntTSL 316.66■□□□□ 0.261e-6■■■□□ 16.6
DDX52Q9Y2R4 PISD-211ENST00000460723 2534 ntTSL 1 (best)15.76■□□□□ 0.111e-6■■■□□ 16.6
DDX52Q9Y2R4 PISD-203ENST00000397500 2194 ntTSL 5 BASIC15.11■□□□□ 0.011e-6■■■□□ 16.6
DDX52Q9Y2R4 PISD-208ENST00000437808 2264 ntTSL 513.88□□□□□ -0.191e-6■■■□□ 16.6
DDX52Q9Y2R4 PISD-204ENST00000422020 1015 ntTSL 513.26□□□□□ -0.291e-6■■■□□ 16.6
DDX52Q9Y2R4 PISD-207ENST00000435900 1723 ntTSL 513.13□□□□□ -0.311e-6■■■□□ 16.6
DDX52Q9Y2R4 PISD-201ENST00000266095 2655 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.471e-6■■■□□ 16.6
DDX52Q9Y2R4 BCR-207ENST00000463770 168 ntTSL 1 (best)17.46■□□□□ 0.392e-6■■■□□ 16.6
DDX52Q9Y2R4 BCR-212ENST00000479188 658 ntTSL 416.08■□□□□ 0.162e-6■■■□□ 16.6
DDX52Q9Y2R4 BCR-214ENST00000487679 231 ntTSL 1 (best)9.89□□□□□ -0.832e-6■■■□□ 16.6
DDX52Q9Y2R4 PPP6R1-207ENST00000591602 520 ntTSL 519.27■□□□□ 0.683e-6■■■□□ 16.6
DDX52Q9Y2R4 PPP6R1-206ENST00000591323 848 ntTSL 319.01■□□□□ 0.633e-6■■■□□ 16.6
DDX52Q9Y2R4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.253e-6■■■□□ 16.6
DDX52Q9Y2R4 C12orf57-203ENST00000538392 979 ntTSL 222.38■■□□□ 1.178e-14■■■□□ 16.5
DDX52Q9Y2R4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.43■□□□□ 0.388e-14■■■□□ 16.5
DDX52Q9Y2R4 C12orf57-202ENST00000537087 662 ntTSL 2 BASIC13.05□□□□□ -0.328e-14■■■□□ 16.5
DDX52Q9Y2R4 C12orf57-207ENST00000545581 556 ntTSL 311.14□□□□□ -0.638e-14■■■□□ 16.5
DDX52Q9Y2R4 C12orf57-205ENST00000542222 640 ntTSL 210.9□□□□□ -0.668e-14■■■□□ 16.5
DDX52Q9Y2R4 MICALL2-202ENST00000413446 3046 ntTSL 215.4■□□□□ 0.061e-6■■■□□ 16.5
DDX52Q9Y2R4 MT-TF-201ENST00000387314 71 ntBASIC0.85□□□□□ -2.271e-323■■■□□ 16.5
DDX52Q9Y2R4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.081e-6■■■□□ 16.5
DDX52Q9Y2R4 RANBP1-207ENST00000423859 832 ntTSL 321.89■■□□□ 1.093e-7■■■□□ 16.5
DDX52Q9Y2R4 RANBP1-205ENST00000418705 932 ntTSL 319.65■□□□□ 0.743e-7■■■□□ 16.5
DDX52Q9Y2R4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.485e-7■■■□□ 16.5
DDX52Q9Y2R4 SEMA4C-203ENST00000449330 839 ntTSL 317.35■□□□□ 0.375e-7■■■□□ 16.5
DDX52Q9Y2R4 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.82■□□□□ 0.126e-9■■■□□ 16.5
DDX52Q9Y2R4 RANBP1-211ENST00000448394 688 ntTSL 217.21■□□□□ 0.353e-7■■■□□ 16.5
DDX52Q9Y2R4 FADS1-217ENST00000544309 581 ntTSL 321.58■■□□□ 1.054e-7■■■□□ 16.4
DDX52Q9Y2R4 FADS1-215ENST00000541683 1844 ntTSL 220.13■□□□□ 0.814e-7■■■□□ 16.4
DDX52Q9Y2R4 FADS1-202ENST00000421879 583 ntTSL 319.81■□□□□ 0.764e-7■■■□□ 16.4
DDX52Q9Y2R4 FADS1-209ENST00000491310 525 ntTSL 516.6■□□□□ 0.254e-7■■■□□ 16.4
DDX52Q9Y2R4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.124e-7■■■□□ 16.4
DDX52Q9Y2R4 FADS1-203ENST00000424501 926 ntTSL 315.78■□□□□ 0.124e-7■■■□□ 16.4
DDX52Q9Y2R4 FADS1-205ENST00000448607 559 ntTSL 414.35□□□□□ -0.114e-7■■■□□ 16.4
DDX52Q9Y2R4 SH2B1-210ENST00000566176 546 ntTSL 410.94□□□□□ -0.664e-7■■■□□ 16.4
DDX52Q9Y2R4 GET4-204ENST00000426056 502 ntTSL 412.75□□□□□ -0.373e-6■■■□□ 16.3
DDX52Q9Y2R4 ROR2-203ENST00000476440 316 ntTSL 57.1□□□□□ -1.274e-6■■■□□ 16.3
DDX52Q9Y2R4 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.752e-6■■■□□ 16.3
DDX52Q9Y2R4 BCOR-206ENST00000406200 4216 ntTSL 210.35□□□□□ -0.752e-6■■■□□ 16.3
DDX52Q9Y2R4 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.932e-6■■■□□ 16.3
DDX52Q9Y2R4 EIF4A1-219ENST00000581770 447 ntTSL 216.36■□□□□ 0.211e-7■■■□□ 16.3
DDX52Q9Y2R4 PSMG4-201ENST00000324987 778 ntTSL 332.22■■■□□ 2.757e-6■■■□□ 16.3
DDX52Q9Y2R4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.22■■■□□ 2.757e-6■■■□□ 16.3
DDX52Q9Y2R4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.49■■■□□ 2.637e-6■■■□□ 16.3
DDX52Q9Y2R4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.94■■■□□ 2.227e-6■■■□□ 16.3
DDX52Q9Y2R4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.227e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-221ENST00000479735 543 ntTSL 423.92■■□□□ 1.427e-6■■■□□ 16.3
DDX52Q9Y2R4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.13■□□□□ 0.817e-6■■■□□ 16.3
DDX52Q9Y2R4 PSMG4-210ENST00000509933 2241 ntTSL 216.92■□□□□ 0.37e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-230ENST00000629955 1435 ntTSL 516.68■□□□□ 0.267e-6■■■□□ 16.3
DDX52Q9Y2R4 PSMG4-208ENST00000454610 2323 ntTSL 216.68■□□□□ 0.267e-6■■■□□ 16.3
DDX52Q9Y2R4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.45■□□□□ 0.227e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.187e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-231ENST00000630572 468 ntTSL 516.15■□□□□ 0.187e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-202ENST00000392861 1514 ntTSL 1 (best)15.36■□□□□ 0.057e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.117e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-237ENST00000636732 5073 ntTSL 514.35□□□□□ -0.117e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-214ENST00000462355 656 ntTSL 4 BASIC13.69□□□□□ -0.227e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-235ENST00000636445 2947 ntTSL 512.36□□□□□ -0.437e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-209ENST00000435831 554 ntTSL 412.06□□□□□ -0.487e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-220ENST00000476394 601 ntTSL 311.94□□□□□ -0.57e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-217ENST00000470879 2648 ntTSL 1 (best) BASIC11.92□□□□□ -0.57e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-224ENST00000539609 4061 ntTSL 2 BASIC11.76□□□□□ -0.537e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-207ENST00000431672 709 ntTSL 411.43□□□□□ -0.587e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC11.4□□□□□ -0.587e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC10.43□□□□□ -0.747e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC10.13□□□□□ -0.797e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-212ENST00000453352 581 ntTSL 310.09□□□□□ -0.797e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.827e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-222ENST00000484313 845 ntTSL 1 (best)9.9□□□□□ -0.827e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-216ENST00000465308 1071 ntTSL 59.81□□□□□ -0.847e-6■■■□□ 16.3
Retrieved 100 of 4,483 protein–RNA pairs in 70.4 ms