Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD8Q9HCK8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD8Q9HCK8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD8Q9HCK8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD8Q9HCK8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.9■■□□□ 1.1
CHD8Q9HCK8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD8Q9HCK8 C17orf82-201ENST00000623772 1530 ntBASIC21.9■■□□□ 1.1
CHD8Q9HCK8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD8Q9HCK8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CHD8Q9HCK8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CHD8Q9HCK8 KRT18P61-201ENST00000585825 1298 ntBASIC21.9■■□□□ 1.1
CHD8Q9HCK8 AL109923.1-201ENST00000618799 583 ntBASIC21.9■■□□□ 1.1
CHD8Q9HCK8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.9■■□□□ 1.1
CHD8Q9HCK8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CHD8Q9HCK8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHD8Q9HCK8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD8Q9HCK8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD8Q9HCK8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.89■■□□□ 1.09
CHD8Q9HCK8 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.89■■□□□ 1.09
CHD8Q9HCK8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.89■■□□□ 1.09
CHD8Q9HCK8 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.89■■□□□ 1.09
CHD8Q9HCK8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD8Q9HCK8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD8Q9HCK8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD8Q9HCK8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD8Q9HCK8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CHD8Q9HCK8 AC006455.2-201ENST00000429931 906 ntBASIC21.88■■□□□ 1.09
CHD8Q9HCK8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHD8Q9HCK8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD8Q9HCK8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.88■■□□□ 1.09
CHD8Q9HCK8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CHD8Q9HCK8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.87■■□□□ 1.09
CHD8Q9HCK8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHD8Q9HCK8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
CHD8Q9HCK8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHD8Q9HCK8 AC016769.1-201ENST00000409132 1010 ntBASIC21.87■■□□□ 1.09
CHD8Q9HCK8 AC006970.2-201ENST00000450065 779 ntBASIC21.87■■□□□ 1.09
CHD8Q9HCK8 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.86■■□□□ 1.09
CHD8Q9HCK8 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.86■■□□□ 1.09
CHD8Q9HCK8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CHD8Q9HCK8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD8Q9HCK8 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.86■■□□□ 1.09
CHD8Q9HCK8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHD8Q9HCK8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.86■■□□□ 1.09
CHD8Q9HCK8 AC009102.2-201ENST00000606772 1639 ntBASIC21.85■■□□□ 1.09
CHD8Q9HCK8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CHD8Q9HCK8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
CHD8Q9HCK8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CHD8Q9HCK8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CHD8Q9HCK8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.85■■□□□ 1.09
CHD8Q9HCK8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.85■■□□□ 1.09
CHD8Q9HCK8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.85■■□□□ 1.09
CHD8Q9HCK8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CHD8Q9HCK8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.84■■□□□ 1.09
CHD8Q9HCK8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHD8Q9HCK8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.84■■□□□ 1.09
CHD8Q9HCK8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.84■■□□□ 1.09
CHD8Q9HCK8 AC241377.3-202ENST00000626088 1088 ntBASIC21.84■■□□□ 1.09
CHD8Q9HCK8 AC241585.3-202ENST00000628937 1088 ntBASIC21.84■■□□□ 1.09
CHD8Q9HCK8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHD8Q9HCK8 MIR3181-201ENST00000578512 73 ntBASIC21.84■■□□□ 1.09
CHD8Q9HCK8 MIR6084-201ENST00000622012 110 ntBASIC21.84■■□□□ 1.09
CHD8Q9HCK8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.83■■□□□ 1.09
CHD8Q9HCK8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
CHD8Q9HCK8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.83■■□□□ 1.09
CHD8Q9HCK8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHD8Q9HCK8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.83■■□□□ 1.09
CHD8Q9HCK8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.83■■□□□ 1.09
CHD8Q9HCK8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CHD8Q9HCK8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.83■■□□□ 1.08
CHD8Q9HCK8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.83■■□□□ 1.08
CHD8Q9HCK8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.83■■□□□ 1.08
CHD8Q9HCK8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
CHD8Q9HCK8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHD8Q9HCK8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CHD8Q9HCK8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHD8Q9HCK8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHD8Q9HCK8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHD8Q9HCK8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CHD8Q9HCK8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.82■■□□□ 1.08
CHD8Q9HCK8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CHD8Q9HCK8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CHD8Q9HCK8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD8Q9HCK8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHD8Q9HCK8 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.81■■□□□ 1.08
CHD8Q9HCK8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHD8Q9HCK8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.81■■□□□ 1.08
CHD8Q9HCK8 MIR663A-201ENST00000385250 93 ntBASIC21.81■■□□□ 1.08
CHD8Q9HCK8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHD8Q9HCK8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.81■■□□□ 1.08
CHD8Q9HCK8 AC137761.2-201ENST00000561729 223 ntBASIC21.81■■□□□ 1.08
CHD8Q9HCK8 AC145350.3-201ENST00000569033 163 ntBASIC21.81■■□□□ 1.08
CHD8Q9HCK8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.8■■□□□ 1.08
CHD8Q9HCK8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.8■■□□□ 1.08
CHD8Q9HCK8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD8Q9HCK8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHD8Q9HCK8 AC245100.8-202ENST00000629247 1058 ntBASIC21.8■■□□□ 1.08
CHD8Q9HCK8 AC012414.1-201ENST00000556676 535 ntBASIC21.8■■□□□ 1.08
CHD8Q9HCK8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHD8Q9HCK8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms