Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BBS4Q96RK4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
BBS4Q96RK4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
BBS4Q96RK4 YBX1P4-201ENST00000392794 808 ntBASIC21.72■■□□□ 1.07
BBS4Q96RK4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
BBS4Q96RK4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BBS4Q96RK4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.72■■□□□ 1.07
BBS4Q96RK4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BBS4Q96RK4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BBS4Q96RK4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.71■■□□□ 1.07
BBS4Q96RK4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
BBS4Q96RK4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BBS4Q96RK4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BBS4Q96RK4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
BBS4Q96RK4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BBS4Q96RK4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.71■■□□□ 1.07
BBS4Q96RK4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
BBS4Q96RK4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
BBS4Q96RK4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BBS4Q96RK4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
BBS4Q96RK4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BBS4Q96RK4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BBS4Q96RK4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BBS4Q96RK4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.7■■□□□ 1.06
BBS4Q96RK4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.7■■□□□ 1.06
BBS4Q96RK4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
BBS4Q96RK4 AL161729.1-201ENST00000604104 1402 ntBASIC21.7■■□□□ 1.06
BBS4Q96RK4 AL022069.1-201ENST00000568025 1636 ntBASIC21.69■■□□□ 1.06
BBS4Q96RK4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BBS4Q96RK4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.69■■□□□ 1.06
BBS4Q96RK4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.69■■□□□ 1.06
BBS4Q96RK4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.69■■□□□ 1.06
BBS4Q96RK4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.69■■□□□ 1.06
BBS4Q96RK4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BBS4Q96RK4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
BBS4Q96RK4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BBS4Q96RK4 MIR4281-201ENST00000580852 62 ntBASIC21.68■■□□□ 1.06
BBS4Q96RK4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
BBS4Q96RK4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
BBS4Q96RK4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BBS4Q96RK4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
BBS4Q96RK4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BBS4Q96RK4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BBS4Q96RK4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BBS4Q96RK4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BBS4Q96RK4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BBS4Q96RK4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
BBS4Q96RK4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
BBS4Q96RK4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BBS4Q96RK4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.67■■□□□ 1.06
BBS4Q96RK4 AC103834.1-201ENST00000520383 144 ntBASIC21.67■■□□□ 1.06
BBS4Q96RK4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BBS4Q96RK4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BBS4Q96RK4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.66■■□□□ 1.06
BBS4Q96RK4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BBS4Q96RK4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
BBS4Q96RK4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BBS4Q96RK4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
BBS4Q96RK4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
BBS4Q96RK4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BBS4Q96RK4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.66■■□□□ 1.06
BBS4Q96RK4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.65■■□□□ 1.06
BBS4Q96RK4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BBS4Q96RK4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BBS4Q96RK4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BBS4Q96RK4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.65■■□□□ 1.06
BBS4Q96RK4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.65■■□□□ 1.06
BBS4Q96RK4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.65■■□□□ 1.06
BBS4Q96RK4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.65■■□□□ 1.06
BBS4Q96RK4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.65■■□□□ 1.06
BBS4Q96RK4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BBS4Q96RK4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BBS4Q96RK4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
BBS4Q96RK4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BBS4Q96RK4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.64■■□□□ 1.05
BBS4Q96RK4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BBS4Q96RK4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BBS4Q96RK4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.63■■□□□ 1.05
BBS4Q96RK4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
BBS4Q96RK4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.63■■□□□ 1.05
BBS4Q96RK4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BBS4Q96RK4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.63■■□□□ 1.05
BBS4Q96RK4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BBS4Q96RK4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BBS4Q96RK4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.63■■□□□ 1.05
BBS4Q96RK4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BBS4Q96RK4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BBS4Q96RK4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.62■■□□□ 1.05
BBS4Q96RK4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BBS4Q96RK4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BBS4Q96RK4 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.62■■□□□ 1.05
BBS4Q96RK4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
BBS4Q96RK4 AC103724.3-201ENST00000564481 992 ntBASIC21.62■■□□□ 1.05
BBS4Q96RK4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
BBS4Q96RK4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BBS4Q96RK4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BBS4Q96RK4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BBS4Q96RK4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
BBS4Q96RK4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BBS4Q96RK4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms