Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
PTPRUQ92729 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PTPRUQ92729 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC32.62■■■□□ 2.81
PTPRUQ92729 AC006455.2-201ENST00000429931 906 ntBASIC32.62■■■□□ 2.81
PTPRUQ92729 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
PTPRUQ92729 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC32.62■■■□□ 2.81
PTPRUQ92729 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC32.62■■■□□ 2.81
PTPRUQ92729 AC136469.2-201ENST00000623944 1028 ntBASIC32.62■■■□□ 2.81
PTPRUQ92729 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
PTPRUQ92729 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
PTPRUQ92729 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
PTPRUQ92729 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC32.61■■■□□ 2.81
PTPRUQ92729 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC32.61■■■□□ 2.81
PTPRUQ92729 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC32.61■■■□□ 2.81
PTPRUQ92729 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
PTPRUQ92729 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC32.6■■■□□ 2.81
PTPRUQ92729 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC32.6■■■□□ 2.81
PTPRUQ92729 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PTPRUQ92729 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
PTPRUQ92729 C17orf82-201ENST00000623772 1530 ntBASIC32.6■■■□□ 2.81
PTPRUQ92729 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PTPRUQ92729 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PTPRUQ92729 AC092437.1-201ENST00000624794 1048 ntBASIC32.6■■■□□ 2.81
PTPRUQ92729 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
PTPRUQ92729 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC32.59■■■□□ 2.81
PTPRUQ92729 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
PTPRUQ92729 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC32.59■■■□□ 2.81
PTPRUQ92729 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
PTPRUQ92729 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
PTPRUQ92729 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
PTPRUQ92729 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC32.59■■■□□ 2.81
PTPRUQ92729 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
PTPRUQ92729 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
PTPRUQ92729 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC32.58■■■□□ 2.81
PTPRUQ92729 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
PTPRUQ92729 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC32.57■■■□□ 2.81
PTPRUQ92729 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
PTPRUQ92729 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.8
PTPRUQ92729 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC32.57■■■□□ 2.8
PTPRUQ92729 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
PTPRUQ92729 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
PTPRUQ92729 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
PTPRUQ92729 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
PTPRUQ92729 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC32.56■■■□□ 2.8
PTPRUQ92729 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
PTPRUQ92729 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC32.56■■■□□ 2.8
PTPRUQ92729 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC32.55■■■□□ 2.8
PTPRUQ92729 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PTPRUQ92729 HES6-206ENST00000409574 738 ntTSL 2 BASIC32.55■■■□□ 2.8
PTPRUQ92729 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC32.55■■■□□ 2.8
PTPRUQ92729 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
PTPRUQ92729 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PTPRUQ92729 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
PTPRUQ92729 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
PTPRUQ92729 ASB1-202ENST00000409297 878 ntTSL 5 BASIC32.54■■■□□ 2.8
PTPRUQ92729 KRT18P5-201ENST00000436075 1291 ntBASIC32.54■■■□□ 2.8
PTPRUQ92729 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC32.54■■■□□ 2.8
PTPRUQ92729 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
PTPRUQ92729 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC32.54■■■□□ 2.8
PTPRUQ92729 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC32.54■■■□□ 2.8
PTPRUQ92729 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
PTPRUQ92729 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC32.53■■■□□ 2.8
PTPRUQ92729 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC32.53■■■□□ 2.8
PTPRUQ92729 AC010501.1-201ENST00000606270 1962 ntBASIC32.53■■■□□ 2.8
PTPRUQ92729 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC32.52■■■□□ 2.8
PTPRUQ92729 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC32.52■■■□□ 2.8
PTPRUQ92729 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC32.51■■■□□ 2.8
PTPRUQ92729 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC32.51■■■□□ 2.8
PTPRUQ92729 AC022517.1-201ENST00000592429 346 ntBASIC32.51■■■□□ 2.8
PTPRUQ92729 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC32.51■■■□□ 2.8
PTPRUQ92729 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC32.51■■■□□ 2.8
PTPRUQ92729 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PTPRUQ92729 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PTPRUQ92729 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PTPRUQ92729 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC32.51■■■□□ 2.79
PTPRUQ92729 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
PTPRUQ92729 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC32.51■■■□□ 2.79
PTPRUQ92729 MPST-208ENST00000628507 698 ntTSL 5 BASIC32.51■■■□□ 2.79
PTPRUQ92729 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
PTPRUQ92729 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
PTPRUQ92729 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PTPRUQ92729 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC32.5■■■□□ 2.79
PTPRUQ92729 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
PTPRUQ92729 SNX3-202ENST00000349379 890 ntTSL 2 BASIC32.5■■■□□ 2.79
PTPRUQ92729 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC32.5■■■□□ 2.79
PTPRUQ92729 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PTPRUQ92729 AC034268.1-201ENST00000441047 882 ntBASIC32.5■■■□□ 2.79
PTPRUQ92729 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PTPRUQ92729 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC32.5■■■□□ 2.79
PTPRUQ92729 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC32.5■■■□□ 2.79
PTPRUQ92729 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
PTPRUQ92729 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PTPRUQ92729 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
PTPRUQ92729 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
PTPRUQ92729 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
PTPRUQ92729 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PTPRUQ92729 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC32.49■■■□□ 2.79
PTPRUQ92729 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC32.49■■■□□ 2.79
PTPRUQ92729 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC32.49■■■□□ 2.79
PTPRUQ92729 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC32.49■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms