Protein–RNA interactions for Protein: Q8WVK2

SNRNP27, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, humanhuman

Known RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27Q8WVK2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNRNP27Q8WVK2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNRNP27Q8WVK2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SNRNP27Q8WVK2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SNRNP27Q8WVK2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SNRNP27Q8WVK2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.29■■□□□ 1.16
SNRNP27Q8WVK2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SNRNP27Q8WVK2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SNRNP27Q8WVK2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.29■■□□□ 1.16
SNRNP27Q8WVK2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SNRNP27Q8WVK2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SNRNP27Q8WVK2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SNRNP27Q8WVK2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.28■■□□□ 1.16
SNRNP27Q8WVK2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNRNP27Q8WVK2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNRNP27Q8WVK2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
SNRNP27Q8WVK2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNRNP27Q8WVK2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNRNP27Q8WVK2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SNRNP27Q8WVK2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.27■■□□□ 1.16
SNRNP27Q8WVK2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SNRNP27Q8WVK2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SNRNP27Q8WVK2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.27■■□□□ 1.16
SNRNP27Q8WVK2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.27■■□□□ 1.16
SNRNP27Q8WVK2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.27■■□□□ 1.16
SNRNP27Q8WVK2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.27■■□□□ 1.16
SNRNP27Q8WVK2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SNRNP27Q8WVK2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SNRNP27Q8WVK2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNRNP27Q8WVK2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNRNP27Q8WVK2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SNRNP27Q8WVK2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.26■■□□□ 1.15
SNRNP27Q8WVK2 MIR5787-201ENST00000611784 55 ntBASIC22.26■■□□□ 1.15
SNRNP27Q8WVK2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SNRNP27Q8WVK2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SNRNP27Q8WVK2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNRNP27Q8WVK2 AC135279.3-201ENST00000610945 1311 ntBASIC22.26■■□□□ 1.15
SNRNP27Q8WVK2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNRNP27Q8WVK2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.25■■□□□ 1.15
SNRNP27Q8WVK2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNRNP27Q8WVK2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.25■■□□□ 1.15
SNRNP27Q8WVK2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SNRNP27Q8WVK2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.25■■□□□ 1.15
SNRNP27Q8WVK2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
SNRNP27Q8WVK2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNRNP27Q8WVK2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNRNP27Q8WVK2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNRNP27Q8WVK2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNRNP27Q8WVK2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.24■■□□□ 1.15
SNRNP27Q8WVK2 AC142381.2-201ENST00000566120 298 ntBASIC22.24■■□□□ 1.15
SNRNP27Q8WVK2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SNRNP27Q8WVK2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNRNP27Q8WVK2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SNRNP27Q8WVK2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNRNP27Q8WVK2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SNRNP27Q8WVK2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.23■■□□□ 1.15
SNRNP27Q8WVK2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.23■■□□□ 1.15
SNRNP27Q8WVK2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNRNP27Q8WVK2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNRNP27Q8WVK2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNRNP27Q8WVK2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SNRNP27Q8WVK2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNRNP27Q8WVK2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
SNRNP27Q8WVK2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNRNP27Q8WVK2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SNRNP27Q8WVK2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SNRNP27Q8WVK2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SNRNP27Q8WVK2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.22■■□□□ 1.15
SNRNP27Q8WVK2 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.22■■□□□ 1.15
SNRNP27Q8WVK2 PBX2P1-201ENST00000493219 1291 ntBASIC22.22■■□□□ 1.15
SNRNP27Q8WVK2 SUDS3P1-201ENST00000505831 966 ntBASIC22.22■■□□□ 1.15
SNRNP27Q8WVK2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.22■■□□□ 1.15
SNRNP27Q8WVK2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.22■■□□□ 1.15
SNRNP27Q8WVK2 AC011551.1-201ENST00000614101 683 ntBASIC22.22■■□□□ 1.15
SNRNP27Q8WVK2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SNRNP27Q8WVK2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SNRNP27Q8WVK2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
SNRNP27Q8WVK2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNRNP27Q8WVK2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNRNP27Q8WVK2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.21■■□□□ 1.15
SNRNP27Q8WVK2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.21■■□□□ 1.15
SNRNP27Q8WVK2 AL031432.3-201ENST00000607698 485 ntBASIC22.21■■□□□ 1.15
SNRNP27Q8WVK2 AC068473.5-201ENST00000616428 2072 ntBASIC22.21■■□□□ 1.15
SNRNP27Q8WVK2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNRNP27Q8WVK2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.2■■□□□ 1.15
SNRNP27Q8WVK2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNRNP27Q8WVK2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.2■■□□□ 1.14
SNRNP27Q8WVK2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
SNRNP27Q8WVK2 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.2■■□□□ 1.14
SNRNP27Q8WVK2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.2■■□□□ 1.14
SNRNP27Q8WVK2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNRNP27Q8WVK2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SNRNP27Q8WVK2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNRNP27Q8WVK2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.19■■□□□ 1.14
SNRNP27Q8WVK2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.19■■□□□ 1.14
SNRNP27Q8WVK2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SNRNP27Q8WVK2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SNRNP27Q8WVK2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SNRNP27Q8WVK2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
SNRNP27Q8WVK2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms