Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC096887.2-201ENST00000623443 1957 ntBASIC25.68■■□□□ 1.7
USP38Q8NB14 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.68■■□□□ 1.7
USP38Q8NB14 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.68■■□□□ 1.7
USP38Q8NB14 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
USP38Q8NB14 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.68■■□□□ 1.7
USP38Q8NB14 MIR6722-201ENST00000617286 78 ntBASIC25.68■■□□□ 1.7
USP38Q8NB14 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.68■■□□□ 1.7
USP38Q8NB14 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
USP38Q8NB14 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
USP38Q8NB14 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.67■■□□□ 1.7
USP38Q8NB14 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.67■■□□□ 1.7
USP38Q8NB14 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.67■■□□□ 1.7
USP38Q8NB14 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.67■■□□□ 1.7
USP38Q8NB14 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.67■■□□□ 1.7
USP38Q8NB14 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
USP38Q8NB14 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
USP38Q8NB14 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
USP38Q8NB14 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
USP38Q8NB14 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.66■■□□□ 1.7
USP38Q8NB14 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
USP38Q8NB14 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
USP38Q8NB14 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.66■■□□□ 1.7
USP38Q8NB14 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.66■■□□□ 1.7
USP38Q8NB14 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
USP38Q8NB14 ERN1-208ENST00000606895 2068 ntBASIC25.66■■□□□ 1.7
USP38Q8NB14 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
USP38Q8NB14 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
USP38Q8NB14 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
USP38Q8NB14 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.65■■□□□ 1.7
USP38Q8NB14 SNX5-217ENST00000606557 1087 ntBASIC25.65■■□□□ 1.7
USP38Q8NB14 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.65■■□□□ 1.7
USP38Q8NB14 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
USP38Q8NB14 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
USP38Q8NB14 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
USP38Q8NB14 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
USP38Q8NB14 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.64■■□□□ 1.7
USP38Q8NB14 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.64■■□□□ 1.7
USP38Q8NB14 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.64■■□□□ 1.7
USP38Q8NB14 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
USP38Q8NB14 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.63■■□□□ 1.69
USP38Q8NB14 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.63■■□□□ 1.69
USP38Q8NB14 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.63■■□□□ 1.69
USP38Q8NB14 AC010501.1-201ENST00000606270 1962 ntBASIC25.63■■□□□ 1.69
USP38Q8NB14 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
USP38Q8NB14 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.63■■□□□ 1.69
USP38Q8NB14 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.62■■□□□ 1.69
USP38Q8NB14 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
USP38Q8NB14 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.62■■□□□ 1.69
USP38Q8NB14 AL162430.1-201ENST00000480705 870 ntBASIC25.62■■□□□ 1.69
USP38Q8NB14 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
USP38Q8NB14 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.62■■□□□ 1.69
USP38Q8NB14 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
USP38Q8NB14 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
USP38Q8NB14 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
USP38Q8NB14 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.61■■□□□ 1.69
USP38Q8NB14 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.61■■□□□ 1.69
USP38Q8NB14 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.61■■□□□ 1.69
USP38Q8NB14 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.61■■□□□ 1.69
USP38Q8NB14 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
USP38Q8NB14 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
USP38Q8NB14 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
USP38Q8NB14 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
USP38Q8NB14 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
USP38Q8NB14 MIR6821-201ENST00000617625 74 ntBASIC25.6■■□□□ 1.69
USP38Q8NB14 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
USP38Q8NB14 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
USP38Q8NB14 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
USP38Q8NB14 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.59■■□□□ 1.69
USP38Q8NB14 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
USP38Q8NB14 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.59■■□□□ 1.69
USP38Q8NB14 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
USP38Q8NB14 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
USP38Q8NB14 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.58■■□□□ 1.69
USP38Q8NB14 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
USP38Q8NB14 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
USP38Q8NB14 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
USP38Q8NB14 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.58■■□□□ 1.69
USP38Q8NB14 AC105265.2-201ENST00000467189 838 ntBASIC25.58■■□□□ 1.69
USP38Q8NB14 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
USP38Q8NB14 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.58■■□□□ 1.69
USP38Q8NB14 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
USP38Q8NB14 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.57■■□□□ 1.68
USP38Q8NB14 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
USP38Q8NB14 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
USP38Q8NB14 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
USP38Q8NB14 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
USP38Q8NB14 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.56■■□□□ 1.68
USP38Q8NB14 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
USP38Q8NB14 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
USP38Q8NB14 AC087623.3-201ENST00000607047 1098 ntBASIC25.56■■□□□ 1.68
USP38Q8NB14 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
USP38Q8NB14 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
USP38Q8NB14 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
USP38Q8NB14 UNC93B3-201ENST00000308076 687 ntBASIC25.55■■□□□ 1.68
USP38Q8NB14 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.55■■□□□ 1.68
USP38Q8NB14 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.55■■□□□ 1.68
USP38Q8NB14 AC090192.1-201ENST00000517740 490 ntBASIC25.55■■□□□ 1.68
USP38Q8NB14 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
USP38Q8NB14 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.54■■□□□ 1.68
USP38Q8NB14 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms