Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LRTM2Q8N967 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRTM2Q8N967 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.82■□□□□ 0.6
LRTM2Q8N967 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.82■□□□□ 0.6
LRTM2Q8N967 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRTM2Q8N967 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRTM2Q8N967 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRTM2Q8N967 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRTM2Q8N967 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LRTM2Q8N967 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM2Q8N967 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.81■□□□□ 0.6
LRTM2Q8N967 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM2Q8N967 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM2Q8N967 CR559946.2-201ENST00000623684 991 ntBASIC18.81■□□□□ 0.6
LRTM2Q8N967 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM2Q8N967 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM2Q8N967 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
LRTM2Q8N967 AL161729.1-201ENST00000604104 1402 ntBASIC18.81■□□□□ 0.6
LRTM2Q8N967 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM2Q8N967 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM2Q8N967 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM2Q8N967 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRTM2Q8N967 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.8■□□□□ 0.6
LRTM2Q8N967 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRTM2Q8N967 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRTM2Q8N967 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.8■□□□□ 0.6
LRTM2Q8N967 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRTM2Q8N967 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
LRTM2Q8N967 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM2Q8N967 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LRTM2Q8N967 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM2Q8N967 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM2Q8N967 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM2Q8N967 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.79■□□□□ 0.6
LRTM2Q8N967 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM2Q8N967 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM2Q8N967 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LRTM2Q8N967 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM2Q8N967 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM2Q8N967 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.78■□□□□ 0.6
LRTM2Q8N967 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
LRTM2Q8N967 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM2Q8N967 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM2Q8N967 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM2Q8N967 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.78■□□□□ 0.6
LRTM2Q8N967 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM2Q8N967 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM2Q8N967 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM2Q8N967 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.77■□□□□ 0.6
LRTM2Q8N967 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM2Q8N967 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM2Q8N967 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.77■□□□□ 0.6
LRTM2Q8N967 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.77■□□□□ 0.6
LRTM2Q8N967 AC060814.1-201ENST00000554326 538 ntBASIC18.77■□□□□ 0.6
LRTM2Q8N967 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
LRTM2Q8N967 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.77■□□□□ 0.6
LRTM2Q8N967 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM2Q8N967 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM2Q8N967 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.77■□□□□ 0.59
LRTM2Q8N967 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.77■□□□□ 0.59
LRTM2Q8N967 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRTM2Q8N967 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRTM2Q8N967 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.76■□□□□ 0.59
LRTM2Q8N967 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRTM2Q8N967 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.76■□□□□ 0.59
LRTM2Q8N967 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRTM2Q8N967 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LRTM2Q8N967 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRTM2Q8N967 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.75■□□□□ 0.59
LRTM2Q8N967 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.75■□□□□ 0.59
LRTM2Q8N967 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRTM2Q8N967 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRTM2Q8N967 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LRTM2Q8N967 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRTM2Q8N967 RP9P-202ENST00000450133 1212 ntBASIC18.75■□□□□ 0.59
LRTM2Q8N967 ZNRF2P2-203ENST00000454624 420 ntBASIC18.75■□□□□ 0.59
LRTM2Q8N967 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRTM2Q8N967 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
LRTM2Q8N967 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRTM2Q8N967 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.74■□□□□ 0.59
LRTM2Q8N967 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM2Q8N967 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM2Q8N967 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM2Q8N967 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.74■□□□□ 0.59
LRTM2Q8N967 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM2Q8N967 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM2Q8N967 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.74■□□□□ 0.59
LRTM2Q8N967 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM2Q8N967 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM2Q8N967 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM2Q8N967 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.74■□□□□ 0.59
LRTM2Q8N967 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM2Q8N967 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM2Q8N967 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM2Q8N967 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM2Q8N967 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM2Q8N967 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRTM2Q8N967 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM2Q8N967 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRTM2Q8N967 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms