Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C11orf42Q8N5U0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
C11orf42Q8N5U0 Z92544.1-202ENST00000571933 1220 ntBASIC19.03■□□□□ 0.64
C11orf42Q8N5U0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C11orf42Q8N5U0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.03■□□□□ 0.64
C11orf42Q8N5U0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C11orf42Q8N5U0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
C11orf42Q8N5U0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
C11orf42Q8N5U0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.03■□□□□ 0.64
C11orf42Q8N5U0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.03■□□□□ 0.64
C11orf42Q8N5U0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C11orf42Q8N5U0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
C11orf42Q8N5U0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
C11orf42Q8N5U0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.02■□□□□ 0.64
C11orf42Q8N5U0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.02■□□□□ 0.64
C11orf42Q8N5U0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.02■□□□□ 0.64
C11orf42Q8N5U0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
C11orf42Q8N5U0 AL139125.2-201ENST00000623134 1869 ntBASIC19.01■□□□□ 0.63
C11orf42Q8N5U0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
C11orf42Q8N5U0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
C11orf42Q8N5U0 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.01■□□□□ 0.63
C11orf42Q8N5U0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
C11orf42Q8N5U0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
C11orf42Q8N5U0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C11orf42Q8N5U0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C11orf42Q8N5U0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C11orf42Q8N5U0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
C11orf42Q8N5U0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19■□□□□ 0.63
C11orf42Q8N5U0 BX664725.1-201ENST00000438252 379 ntBASIC19■□□□□ 0.63
C11orf42Q8N5U0 AC239859.2-201ENST00000444165 318 ntBASIC19■□□□□ 0.63
C11orf42Q8N5U0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19■□□□□ 0.63
C11orf42Q8N5U0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19■□□□□ 0.63
C11orf42Q8N5U0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19■□□□□ 0.63
C11orf42Q8N5U0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19■□□□□ 0.63
C11orf42Q8N5U0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19■□□□□ 0.63
C11orf42Q8N5U0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C11orf42Q8N5U0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19■□□□□ 0.63
C11orf42Q8N5U0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
C11orf42Q8N5U0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
C11orf42Q8N5U0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.99■□□□□ 0.63
C11orf42Q8N5U0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.99■□□□□ 0.63
C11orf42Q8N5U0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C11orf42Q8N5U0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.99■□□□□ 0.63
C11orf42Q8N5U0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
C11orf42Q8N5U0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf42Q8N5U0 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.98■□□□□ 0.63
C11orf42Q8N5U0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf42Q8N5U0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.98■□□□□ 0.63
C11orf42Q8N5U0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf42Q8N5U0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf42Q8N5U0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf42Q8N5U0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf42Q8N5U0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
C11orf42Q8N5U0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf42Q8N5U0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
C11orf42Q8N5U0 AC131274.2-201ENST00000580697 1507 ntBASIC18.96■□□□□ 0.63
C11orf42Q8N5U0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf42Q8N5U0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf42Q8N5U0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf42Q8N5U0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf42Q8N5U0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf42Q8N5U0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.96■□□□□ 0.63
C11orf42Q8N5U0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf42Q8N5U0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf42Q8N5U0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf42Q8N5U0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
C11orf42Q8N5U0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf42Q8N5U0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf42Q8N5U0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf42Q8N5U0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.95■□□□□ 0.62
C11orf42Q8N5U0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf42Q8N5U0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.95■□□□□ 0.62
C11orf42Q8N5U0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.95■□□□□ 0.62
C11orf42Q8N5U0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.95■□□□□ 0.62
C11orf42Q8N5U0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.95■□□□□ 0.62
C11orf42Q8N5U0 MIR4787-201ENST00000607364 84 ntBASIC18.95■□□□□ 0.62
C11orf42Q8N5U0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf42Q8N5U0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C11orf42Q8N5U0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C11orf42Q8N5U0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C11orf42Q8N5U0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
C11orf42Q8N5U0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C11orf42Q8N5U0 KRT125P-201ENST00000546827 989 ntBASIC18.94■□□□□ 0.62
C11orf42Q8N5U0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
C11orf42Q8N5U0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms