Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC28.63■■■□□ 2.17
SMC5Q8IY18 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SMC5Q8IY18 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.63■■■□□ 2.17
SMC5Q8IY18 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.63■■■□□ 2.17
SMC5Q8IY18 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.63■■■□□ 2.17
SMC5Q8IY18 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC28.63■■■□□ 2.17
SMC5Q8IY18 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
SMC5Q8IY18 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMC5Q8IY18 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
SMC5Q8IY18 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMC5Q8IY18 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMC5Q8IY18 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMC5Q8IY18 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
SMC5Q8IY18 AC131274.2-201ENST00000580697 1507 ntBASIC28.62■■■□□ 2.17
SMC5Q8IY18 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMC5Q8IY18 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMC5Q8IY18 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC28.62■■■□□ 2.17
SMC5Q8IY18 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC28.61■■■□□ 2.17
SMC5Q8IY18 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMC5Q8IY18 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SMC5Q8IY18 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SMC5Q8IY18 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.61■■■□□ 2.17
SMC5Q8IY18 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.61■■■□□ 2.17
SMC5Q8IY18 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SMC5Q8IY18 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SMC5Q8IY18 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.6■■■□□ 2.17
SMC5Q8IY18 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SMC5Q8IY18 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SMC5Q8IY18 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC28.6■■■□□ 2.17
SMC5Q8IY18 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC28.59■■■□□ 2.17
SMC5Q8IY18 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SMC5Q8IY18 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC28.59■■■□□ 2.17
SMC5Q8IY18 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC28.59■■■□□ 2.17
SMC5Q8IY18 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.59■■■□□ 2.17
SMC5Q8IY18 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
SMC5Q8IY18 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SMC5Q8IY18 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC28.59■■■□□ 2.17
SMC5Q8IY18 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
SMC5Q8IY18 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC28.58■■■□□ 2.17
SMC5Q8IY18 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.58■■■□□ 2.17
SMC5Q8IY18 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SMC5Q8IY18 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC28.58■■■□□ 2.17
SMC5Q8IY18 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC28.58■■■□□ 2.17
SMC5Q8IY18 TSPY13P-201ENST00000338964 914 ntBASIC28.58■■■□□ 2.17
SMC5Q8IY18 AC074183.2-201ENST00000623112 922 ntBASIC28.58■■■□□ 2.17
SMC5Q8IY18 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC28.58■■■□□ 2.17
SMC5Q8IY18 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SMC5Q8IY18 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
SMC5Q8IY18 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.57■■■□□ 2.16
SMC5Q8IY18 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC28.57■■■□□ 2.16
SMC5Q8IY18 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SMC5Q8IY18 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.56■■■□□ 2.16
SMC5Q8IY18 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SMC5Q8IY18 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC28.56■■■□□ 2.16
SMC5Q8IY18 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SMC5Q8IY18 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
SMC5Q8IY18 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SMC5Q8IY18 AC120024.1-201ENST00000562672 995 ntBASIC28.56■■■□□ 2.16
SMC5Q8IY18 AL022069.1-201ENST00000568025 1636 ntBASIC28.56■■■□□ 2.16
SMC5Q8IY18 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC28.56■■■□□ 2.16
SMC5Q8IY18 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
SMC5Q8IY18 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
SMC5Q8IY18 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SMC5Q8IY18 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
SMC5Q8IY18 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
SMC5Q8IY18 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
SMC5Q8IY18 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.55■■■□□ 2.16
SMC5Q8IY18 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SMC5Q8IY18 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
SMC5Q8IY18 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
SMC5Q8IY18 AC068473.5-201ENST00000616428 2072 ntBASIC28.55■■■□□ 2.16
SMC5Q8IY18 NFE2L3P1-201ENST00000588207 1959 ntBASIC28.55■■■□□ 2.16
SMC5Q8IY18 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC28.54■■■□□ 2.16
SMC5Q8IY18 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.54■■■□□ 2.16
SMC5Q8IY18 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC28.53■■■□□ 2.16
SMC5Q8IY18 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SMC5Q8IY18 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC28.53■■■□□ 2.16
SMC5Q8IY18 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC28.53■■■□□ 2.16
SMC5Q8IY18 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
SMC5Q8IY18 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SMC5Q8IY18 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SMC5Q8IY18 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SMC5Q8IY18 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC28.53■■■□□ 2.16
SMC5Q8IY18 AC133561.1-201ENST00000568600 2415 ntBASIC28.52■■■□□ 2.16
SMC5Q8IY18 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.52■■■□□ 2.16
SMC5Q8IY18 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.52■■■□□ 2.16
SMC5Q8IY18 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC28.52■■■□□ 2.16
SMC5Q8IY18 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.52■■■□□ 2.16
SMC5Q8IY18 AC010980.1-201ENST00000587192 1142 ntBASIC28.52■■■□□ 2.16
SMC5Q8IY18 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.51■■■□□ 2.16
SMC5Q8IY18 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
SMC5Q8IY18 AF131216.4-201ENST00000638924 1588 ntBASIC28.51■■■□□ 2.15
SMC5Q8IY18 KRT18P24-201ENST00000344739 1156 ntBASIC28.51■■■□□ 2.15
SMC5Q8IY18 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SMC5Q8IY18 BHLHE23-202ENST00000612929 1109 ntBASIC28.51■■■□□ 2.15
SMC5Q8IY18 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
SMC5Q8IY18 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
SMC5Q8IY18 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.5■■■□□ 2.15
SMC5Q8IY18 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SMC5Q8IY18 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms