Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRFN4Q6PJG9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRFN4Q6PJG9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
LRFN4Q6PJG9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN4Q6PJG9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LRFN4Q6PJG9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
LRFN4Q6PJG9 CLDN5-201ENST00000403084 2357 ntBASIC20.57■□□□□ 0.88
LRFN4Q6PJG9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN4Q6PJG9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.57■□□□□ 0.88
LRFN4Q6PJG9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.57■□□□□ 0.88
LRFN4Q6PJG9 AC103834.1-201ENST00000520383 144 ntBASIC20.57■□□□□ 0.88
LRFN4Q6PJG9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LRFN4Q6PJG9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN4Q6PJG9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 AC011551.1-201ENST00000614101 683 ntBASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRFN4Q6PJG9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
LRFN4Q6PJG9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRFN4Q6PJG9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRFN4Q6PJG9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.55■□□□□ 0.88
LRFN4Q6PJG9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRFN4Q6PJG9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRFN4Q6PJG9 MIR4508-201ENST00000584178 70 ntBASIC20.55■□□□□ 0.88
LRFN4Q6PJG9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRFN4Q6PJG9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRFN4Q6PJG9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LRFN4Q6PJG9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRFN4Q6PJG9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRFN4Q6PJG9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRFN4Q6PJG9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRFN4Q6PJG9 AC120024.1-201ENST00000562672 995 ntBASIC20.54■□□□□ 0.88
LRFN4Q6PJG9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRFN4Q6PJG9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.54■□□□□ 0.88
LRFN4Q6PJG9 AC141586.4-201ENST00000624558 1573 ntBASIC20.54■□□□□ 0.88
LRFN4Q6PJG9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRFN4Q6PJG9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRFN4Q6PJG9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRFN4Q6PJG9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRFN4Q6PJG9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.53■□□□□ 0.88
LRFN4Q6PJG9 KRT18P24-201ENST00000344739 1156 ntBASIC20.53■□□□□ 0.88
LRFN4Q6PJG9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.53■□□□□ 0.88
LRFN4Q6PJG9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.53■□□□□ 0.88
LRFN4Q6PJG9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.53■□□□□ 0.88
LRFN4Q6PJG9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
LRFN4Q6PJG9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.53■□□□□ 0.88
LRFN4Q6PJG9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRFN4Q6PJG9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.53■□□□□ 0.88
LRFN4Q6PJG9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRFN4Q6PJG9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LRFN4Q6PJG9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRFN4Q6PJG9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRFN4Q6PJG9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LRFN4Q6PJG9 KRT8P33-201ENST00000508125 1423 ntBASIC20.52■□□□□ 0.87
LRFN4Q6PJG9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRFN4Q6PJG9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN4Q6PJG9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN4Q6PJG9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN4Q6PJG9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN4Q6PJG9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.51■□□□□ 0.87
LRFN4Q6PJG9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN4Q6PJG9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.51■□□□□ 0.87
LRFN4Q6PJG9 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.51■□□□□ 0.87
LRFN4Q6PJG9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN4Q6PJG9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN4Q6PJG9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN4Q6PJG9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN4Q6PJG9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN4Q6PJG9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.5■□□□□ 0.87
LRFN4Q6PJG9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN4Q6PJG9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN4Q6PJG9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN4Q6PJG9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN4Q6PJG9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN4Q6PJG9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN4Q6PJG9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN4Q6PJG9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN4Q6PJG9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN4Q6PJG9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LRFN4Q6PJG9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.49■□□□□ 0.87
LRFN4Q6PJG9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN4Q6PJG9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN4Q6PJG9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.49■□□□□ 0.87
LRFN4Q6PJG9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN4Q6PJG9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
LRFN4Q6PJG9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms