Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
RNF43Q68DV7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF43Q68DV7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.06■■□□□ 1.44
RNF43Q68DV7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RNF43Q68DV7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RNF43Q68DV7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF43Q68DV7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF43Q68DV7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.05■■□□□ 1.44
RNF43Q68DV7 UNC93B8-201ENST00000511903 705 ntBASIC24.05■■□□□ 1.44
RNF43Q68DV7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.05■■□□□ 1.44
RNF43Q68DV7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.05■■□□□ 1.44
RNF43Q68DV7 AL139246.5-201ENST00000606645 996 ntBASIC24.05■■□□□ 1.44
RNF43Q68DV7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.05■■□□□ 1.44
RNF43Q68DV7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.05■■□□□ 1.44
RNF43Q68DV7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
RNF43Q68DV7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RNF43Q68DV7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF43Q68DV7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF43Q68DV7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF43Q68DV7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.04■■□□□ 1.44
RNF43Q68DV7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF43Q68DV7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF43Q68DV7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF43Q68DV7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF43Q68DV7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF43Q68DV7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
RNF43Q68DV7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF43Q68DV7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.03■■□□□ 1.44
RNF43Q68DV7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.03■■□□□ 1.44
RNF43Q68DV7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.03■■□□□ 1.44
RNF43Q68DV7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.03■■□□□ 1.44
RNF43Q68DV7 SLC6A10P-202ENST00000431994 2058 ntBASIC24.03■■□□□ 1.44
RNF43Q68DV7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.02■■□□□ 1.44
RNF43Q68DV7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF43Q68DV7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF43Q68DV7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF43Q68DV7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.02■■□□□ 1.44
RNF43Q68DV7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.02■■□□□ 1.44
RNF43Q68DV7 AC092028.1-203ENST00000608262 953 ntBASIC24.02■■□□□ 1.44
RNF43Q68DV7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF43Q68DV7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.02■■□□□ 1.44
RNF43Q68DV7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF43Q68DV7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF43Q68DV7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF43Q68DV7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF43Q68DV7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.01■■□□□ 1.43
RNF43Q68DV7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.01■■□□□ 1.43
RNF43Q68DV7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF43Q68DV7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.01■■□□□ 1.43
RNF43Q68DV7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF43Q68DV7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF43Q68DV7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF43Q68DV7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF43Q68DV7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF43Q68DV7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24■■□□□ 1.43
RNF43Q68DV7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF43Q68DV7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF43Q68DV7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF43Q68DV7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF43Q68DV7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF43Q68DV7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
RNF43Q68DV7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF43Q68DV7 MIR6089-201ENST00000616698 64 ntBASIC23.99■■□□□ 1.43
RNF43Q68DV7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF43Q68DV7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF43Q68DV7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
RNF43Q68DV7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.99■■□□□ 1.43
RNF43Q68DV7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF43Q68DV7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF43Q68DV7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF43Q68DV7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF43Q68DV7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF43Q68DV7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF43Q68DV7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF43Q68DV7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF43Q68DV7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.97■■□□□ 1.43
RNF43Q68DV7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF43Q68DV7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF43Q68DV7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.97■■□□□ 1.43
RNF43Q68DV7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF43Q68DV7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.96■■□□□ 1.43
RNF43Q68DV7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF43Q68DV7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF43Q68DV7 TSPY9P-201ENST00000440215 945 ntBASIC23.96■■□□□ 1.43
RNF43Q68DV7 TSPY11P-201ENST00000442607 1045 ntBASIC23.96■■□□□ 1.43
RNF43Q68DV7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.96■■□□□ 1.43
RNF43Q68DV7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
RNF43Q68DV7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF43Q68DV7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF43Q68DV7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF43Q68DV7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
RNF43Q68DV7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.94■■□□□ 1.42
RNF43Q68DV7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF43Q68DV7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF43Q68DV7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF43Q68DV7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.94■■□□□ 1.42
RNF43Q68DV7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF43Q68DV7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.94■■□□□ 1.42
RNF43Q68DV7 AC068473.5-201ENST00000616428 2072 ntBASIC23.94■■□□□ 1.42
RNF43Q68DV7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms