Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LCN1P1Q5VSP4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LCN1P1Q5VSP4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.67■□□□□ 0.9
LCN1P1Q5VSP4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCN1P1Q5VSP4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LCN1P1Q5VSP4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCN1P1Q5VSP4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCN1P1Q5VSP4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCN1P1Q5VSP4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCN1P1Q5VSP4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCN1P1Q5VSP4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LCN1P1Q5VSP4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.66■□□□□ 0.9
LCN1P1Q5VSP4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LCN1P1Q5VSP4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCN1P1Q5VSP4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCN1P1Q5VSP4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCN1P1Q5VSP4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.66■□□□□ 0.9
LCN1P1Q5VSP4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.66■□□□□ 0.9
LCN1P1Q5VSP4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCN1P1Q5VSP4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCN1P1Q5VSP4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.66■□□□□ 0.9
LCN1P1Q5VSP4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCN1P1Q5VSP4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCN1P1Q5VSP4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCN1P1Q5VSP4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCN1P1Q5VSP4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LCN1P1Q5VSP4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.65■□□□□ 0.9
LCN1P1Q5VSP4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCN1P1Q5VSP4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCN1P1Q5VSP4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LCN1P1Q5VSP4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LCN1P1Q5VSP4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LCN1P1Q5VSP4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.64■□□□□ 0.9
LCN1P1Q5VSP4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LCN1P1Q5VSP4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCN1P1Q5VSP4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCN1P1Q5VSP4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.64■□□□□ 0.89
LCN1P1Q5VSP4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LCN1P1Q5VSP4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCN1P1Q5VSP4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCN1P1Q5VSP4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCN1P1Q5VSP4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCN1P1Q5VSP4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LCN1P1Q5VSP4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.63■□□□□ 0.89
LCN1P1Q5VSP4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCN1P1Q5VSP4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCN1P1Q5VSP4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCN1P1Q5VSP4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCN1P1Q5VSP4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.62■□□□□ 0.89
LCN1P1Q5VSP4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LCN1P1Q5VSP4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCN1P1Q5VSP4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LCN1P1Q5VSP4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCN1P1Q5VSP4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LCN1P1Q5VSP4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 AL117328.2-201ENST00000624617 1940 ntBASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 GPX1-201ENST00000419349 1106 ntBASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.61■□□□□ 0.89
LCN1P1Q5VSP4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCN1P1Q5VSP4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCN1P1Q5VSP4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LCN1P1Q5VSP4 MIR4449-201ENST00000578365 66 ntBASIC20.6■□□□□ 0.89
LCN1P1Q5VSP4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.6■□□□□ 0.89
LCN1P1Q5VSP4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.6■□□□□ 0.89
LCN1P1Q5VSP4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LCN1P1Q5VSP4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.6■□□□□ 0.89
LCN1P1Q5VSP4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCN1P1Q5VSP4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCN1P1Q5VSP4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCN1P1Q5VSP4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LCN1P1Q5VSP4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCN1P1Q5VSP4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCN1P1Q5VSP4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCN1P1Q5VSP4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LCN1P1Q5VSP4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCN1P1Q5VSP4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.59■□□□□ 0.89
LCN1P1Q5VSP4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LCN1P1Q5VSP4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.59■□□□□ 0.89
LCN1P1Q5VSP4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LCN1P1Q5VSP4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCN1P1Q5VSP4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCN1P1Q5VSP4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCN1P1Q5VSP4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCN1P1Q5VSP4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
LCN1P1Q5VSP4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LCN1P1Q5VSP4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
LCN1P1Q5VSP4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LCN1P1Q5VSP4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms