Protein–RNA interactions for Protein: Q5RKV6

EXOSC6, Exosome complex component MTR3, humanhuman

Known RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC6Q5RKV6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EXOSC6Q5RKV6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
EXOSC6Q5RKV6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EXOSC6Q5RKV6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
EXOSC6Q5RKV6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.35■■□□□ 1.01
EXOSC6Q5RKV6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
EXOSC6Q5RKV6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EXOSC6Q5RKV6 AL022069.1-201ENST00000568025 1636 ntBASIC21.35■■□□□ 1.01
EXOSC6Q5RKV6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
EXOSC6Q5RKV6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
EXOSC6Q5RKV6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.34■■□□□ 1.01
EXOSC6Q5RKV6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.34■■□□□ 1.01
EXOSC6Q5RKV6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.34■■□□□ 1.01
EXOSC6Q5RKV6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EXOSC6Q5RKV6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EXOSC6Q5RKV6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EXOSC6Q5RKV6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EXOSC6Q5RKV6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EXOSC6Q5RKV6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
EXOSC6Q5RKV6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
EXOSC6Q5RKV6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EXOSC6Q5RKV6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EXOSC6Q5RKV6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.33■■□□□ 1.01
EXOSC6Q5RKV6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EXOSC6Q5RKV6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
EXOSC6Q5RKV6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
EXOSC6Q5RKV6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EXOSC6Q5RKV6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EXOSC6Q5RKV6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.32■■□□□ 1
EXOSC6Q5RKV6 KRT8P33-201ENST00000508125 1423 ntBASIC21.32■■□□□ 1
EXOSC6Q5RKV6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EXOSC6Q5RKV6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.32■■□□□ 1
EXOSC6Q5RKV6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.32■■□□□ 1
EXOSC6Q5RKV6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
EXOSC6Q5RKV6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.32■■□□□ 1
EXOSC6Q5RKV6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EXOSC6Q5RKV6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.31■■□□□ 1
EXOSC6Q5RKV6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EXOSC6Q5RKV6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EXOSC6Q5RKV6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.31■■□□□ 1
EXOSC6Q5RKV6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
EXOSC6Q5RKV6 YBX1P4-201ENST00000392794 808 ntBASIC21.31■■□□□ 1
EXOSC6Q5RKV6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.31■■□□□ 1
EXOSC6Q5RKV6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.31■■□□□ 1
EXOSC6Q5RKV6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EXOSC6Q5RKV6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.31■■□□□ 1
EXOSC6Q5RKV6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.3■■□□□ 1
EXOSC6Q5RKV6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
EXOSC6Q5RKV6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.3■■□□□ 1
EXOSC6Q5RKV6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.3■■□□□ 1
EXOSC6Q5RKV6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.3■■□□□ 1
EXOSC6Q5RKV6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.3■■□□□ 1
EXOSC6Q5RKV6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.3■■□□□ 1
EXOSC6Q5RKV6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EXOSC6Q5RKV6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EXOSC6Q5RKV6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.29■■□□□ 1
EXOSC6Q5RKV6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.29■■□□□ 1
EXOSC6Q5RKV6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.29■■□□□ 1
EXOSC6Q5RKV6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.29■■□□□ 1
EXOSC6Q5RKV6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EXOSC6Q5RKV6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EXOSC6Q5RKV6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EXOSC6Q5RKV6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
EXOSC6Q5RKV6 AC137630.3-201ENST00000607245 391 ntBASIC21.28■■□□□ 1
EXOSC6Q5RKV6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.28■■□□□ 1
EXOSC6Q5RKV6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EXOSC6Q5RKV6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
EXOSC6Q5RKV6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
EXOSC6Q5RKV6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.27■■□□□ 1
EXOSC6Q5RKV6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.27■■□□□ 1
EXOSC6Q5RKV6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EXOSC6Q5RKV6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.27■■□□□ 1
EXOSC6Q5RKV6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EXOSC6Q5RKV6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EXOSC6Q5RKV6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EXOSC6Q5RKV6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.26■□□□□ 0.99
EXOSC6Q5RKV6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EXOSC6Q5RKV6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
EXOSC6Q5RKV6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.26■□□□□ 0.99
EXOSC6Q5RKV6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EXOSC6Q5RKV6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EXOSC6Q5RKV6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EXOSC6Q5RKV6 AC004448.1-201ENST00000458332 883 ntBASIC21.26■□□□□ 0.99
EXOSC6Q5RKV6 AL031848.2-201ENST00000607670 837 ntBASIC21.26■□□□□ 0.99
EXOSC6Q5RKV6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EXOSC6Q5RKV6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
EXOSC6Q5RKV6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.26■□□□□ 0.99
EXOSC6Q5RKV6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.25■□□□□ 0.99
EXOSC6Q5RKV6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.25■□□□□ 0.99
EXOSC6Q5RKV6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
EXOSC6Q5RKV6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EXOSC6Q5RKV6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.25■□□□□ 0.99
EXOSC6Q5RKV6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.25■□□□□ 0.99
EXOSC6Q5RKV6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EXOSC6Q5RKV6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EXOSC6Q5RKV6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
EXOSC6Q5RKV6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
EXOSC6Q5RKV6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
EXOSC6Q5RKV6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EXOSC6Q5RKV6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms