Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RSPO1Q2MKA7 AC103724.3-201ENST00000564481 992 ntBASIC20.02■□□□□ 0.8
RSPO1Q2MKA7 THA1P-201ENST00000590384 1145 ntBASIC20.02■□□□□ 0.8
RSPO1Q2MKA7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RSPO1Q2MKA7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RSPO1Q2MKA7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RSPO1Q2MKA7 KRT8P33-201ENST00000508125 1423 ntBASIC20.02■□□□□ 0.79
RSPO1Q2MKA7 AL161729.1-201ENST00000604104 1402 ntBASIC20.02■□□□□ 0.79
RSPO1Q2MKA7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RSPO1Q2MKA7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RSPO1Q2MKA7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RSPO1Q2MKA7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.01■□□□□ 0.79
RSPO1Q2MKA7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.01■□□□□ 0.79
RSPO1Q2MKA7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.01■□□□□ 0.79
RSPO1Q2MKA7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RSPO1Q2MKA7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RSPO1Q2MKA7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
RSPO1Q2MKA7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RSPO1Q2MKA7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20■□□□□ 0.79
RSPO1Q2MKA7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RSPO1Q2MKA7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20■□□□□ 0.79
RSPO1Q2MKA7 LBH-205ENST00000407930 756 ntTSL 2 BASIC20■□□□□ 0.79
RSPO1Q2MKA7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20■□□□□ 0.79
RSPO1Q2MKA7 AL022069.1-201ENST00000568025 1636 ntBASIC20■□□□□ 0.79
RSPO1Q2MKA7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RSPO1Q2MKA7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20■□□□□ 0.79
RSPO1Q2MKA7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RSPO1Q2MKA7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RSPO1Q2MKA7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20■□□□□ 0.79
RSPO1Q2MKA7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
RSPO1Q2MKA7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RSPO1Q2MKA7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO1Q2MKA7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.99■□□□□ 0.79
RSPO1Q2MKA7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.99■□□□□ 0.79
RSPO1Q2MKA7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RSPO1Q2MKA7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO1Q2MKA7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO1Q2MKA7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO1Q2MKA7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.99■□□□□ 0.79
RSPO1Q2MKA7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO1Q2MKA7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RSPO1Q2MKA7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RSPO1Q2MKA7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RSPO1Q2MKA7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.98■□□□□ 0.79
RSPO1Q2MKA7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RSPO1Q2MKA7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RSPO1Q2MKA7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RSPO1Q2MKA7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RSPO1Q2MKA7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RSPO1Q2MKA7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RSPO1Q2MKA7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RSPO1Q2MKA7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RSPO1Q2MKA7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.97■□□□□ 0.79
RSPO1Q2MKA7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.97■□□□□ 0.79
RSPO1Q2MKA7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RSPO1Q2MKA7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.97■□□□□ 0.79
RSPO1Q2MKA7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.97■□□□□ 0.79
RSPO1Q2MKA7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RSPO1Q2MKA7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RSPO1Q2MKA7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.97■□□□□ 0.79
RSPO1Q2MKA7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RSPO1Q2MKA7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.96■□□□□ 0.79
RSPO1Q2MKA7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO1Q2MKA7 YBX1P4-201ENST00000392794 808 ntBASIC19.96■□□□□ 0.79
RSPO1Q2MKA7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO1Q2MKA7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RSPO1Q2MKA7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO1Q2MKA7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO1Q2MKA7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.95■□□□□ 0.78
RSPO1Q2MKA7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RSPO1Q2MKA7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.95■□□□□ 0.78
RSPO1Q2MKA7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.95■□□□□ 0.78
RSPO1Q2MKA7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.95■□□□□ 0.78
RSPO1Q2MKA7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RSPO1Q2MKA7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RSPO1Q2MKA7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RSPO1Q2MKA7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RSPO1Q2MKA7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RSPO1Q2MKA7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.95■□□□□ 0.78
RSPO1Q2MKA7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RSPO1Q2MKA7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RSPO1Q2MKA7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.94■□□□□ 0.78
RSPO1Q2MKA7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RSPO1Q2MKA7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RSPO1Q2MKA7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RSPO1Q2MKA7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RSPO1Q2MKA7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RSPO1Q2MKA7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.94■□□□□ 0.78
RSPO1Q2MKA7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.94■□□□□ 0.78
RSPO1Q2MKA7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RSPO1Q2MKA7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RSPO1Q2MKA7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RSPO1Q2MKA7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RSPO1Q2MKA7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RSPO1Q2MKA7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RSPO1Q2MKA7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RSPO1Q2MKA7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RSPO1Q2MKA7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RSPO1Q2MKA7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RSPO1Q2MKA7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms