Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDS5AQ29RF7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC27.84■■■□□ 2.05
PDS5AQ29RF7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC27.84■■■□□ 2.05
PDS5AQ29RF7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDS5AQ29RF7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDS5AQ29RF7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
PDS5AQ29RF7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
PDS5AQ29RF7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC27.84■■■□□ 2.05
PDS5AQ29RF7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDS5AQ29RF7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC27.84■■■□□ 2.05
PDS5AQ29RF7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDS5AQ29RF7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC27.84■■■□□ 2.05
PDS5AQ29RF7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PDS5AQ29RF7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PDS5AQ29RF7 AC022211.4-201ENST00000625094 2161 ntBASIC27.83■■■□□ 2.05
PDS5AQ29RF7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PDS5AQ29RF7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
PDS5AQ29RF7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
PDS5AQ29RF7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
PDS5AQ29RF7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PDS5AQ29RF7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.83■■■□□ 2.05
PDS5AQ29RF7 AP003733.4-201ENST00000623785 1697 ntBASIC27.83■■■□□ 2.05
PDS5AQ29RF7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
PDS5AQ29RF7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
PDS5AQ29RF7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC27.82■■■□□ 2.04
PDS5AQ29RF7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
PDS5AQ29RF7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.82■■■□□ 2.04
PDS5AQ29RF7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC27.82■■■□□ 2.04
PDS5AQ29RF7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC27.82■■■□□ 2.04
PDS5AQ29RF7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PDS5AQ29RF7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
PDS5AQ29RF7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.82■■■□□ 2.04
PDS5AQ29RF7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
PDS5AQ29RF7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.82■■■□□ 2.04
PDS5AQ29RF7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC27.81■■■□□ 2.04
PDS5AQ29RF7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PDS5AQ29RF7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PDS5AQ29RF7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
PDS5AQ29RF7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PDS5AQ29RF7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
PDS5AQ29RF7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC27.81■■■□□ 2.04
PDS5AQ29RF7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PDS5AQ29RF7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC27.81■■■□□ 2.04
PDS5AQ29RF7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PDS5AQ29RF7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC27.8■■■□□ 2.04
PDS5AQ29RF7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PDS5AQ29RF7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PDS5AQ29RF7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PDS5AQ29RF7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PDS5AQ29RF7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
PDS5AQ29RF7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
PDS5AQ29RF7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC27.8■■■□□ 2.04
PDS5AQ29RF7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
PDS5AQ29RF7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PDS5AQ29RF7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PDS5AQ29RF7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC27.79■■■□□ 2.04
PDS5AQ29RF7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
PDS5AQ29RF7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
PDS5AQ29RF7 AC096631.2-201ENST00000436136 790 ntBASIC27.79■■■□□ 2.04
PDS5AQ29RF7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
PDS5AQ29RF7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
PDS5AQ29RF7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
PDS5AQ29RF7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC27.78■■■□□ 2.04
PDS5AQ29RF7 SRD5A1P1-201ENST00000442297 786 ntBASIC27.78■■■□□ 2.04
PDS5AQ29RF7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC27.78■■■□□ 2.04
PDS5AQ29RF7 AC133561.4-201ENST00000566112 224 ntBASIC27.78■■■□□ 2.04
PDS5AQ29RF7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
PDS5AQ29RF7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PDS5AQ29RF7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
PDS5AQ29RF7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PDS5AQ29RF7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
PDS5AQ29RF7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PDS5AQ29RF7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PDS5AQ29RF7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.04
PDS5AQ29RF7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
PDS5AQ29RF7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PDS5AQ29RF7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
PDS5AQ29RF7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
PDS5AQ29RF7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
PDS5AQ29RF7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
PDS5AQ29RF7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
PDS5AQ29RF7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
PDS5AQ29RF7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC27.75■■■□□ 2.03
PDS5AQ29RF7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.75■■■□□ 2.03
PDS5AQ29RF7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC27.75■■■□□ 2.03
PDS5AQ29RF7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
PDS5AQ29RF7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.74■■■□□ 2.03
PDS5AQ29RF7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PDS5AQ29RF7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PDS5AQ29RF7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PDS5AQ29RF7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
PDS5AQ29RF7 RALB-208ENST00000631312 311 ntTSL 5 BASIC27.73■■■□□ 2.03
PDS5AQ29RF7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
PDS5AQ29RF7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
PDS5AQ29RF7 AC142381.3-201ENST00000568208 1670 ntBASIC27.73■■■□□ 2.03
PDS5AQ29RF7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
PDS5AQ29RF7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PDS5AQ29RF7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.72■■■□□ 2.03
PDS5AQ29RF7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PDS5AQ29RF7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms