Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.151e-7■■■■□ 24.3
LSM11P83369 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC11.88□□□□□ -0.511e-7■■■■□ 24.3
LSM11P83369 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.051e-7■■■■□ 24.3
LSM11P83369 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.38□□□□□ -0.272e-30■■■■□ 24.3
LSM11P83369 NCBP2-205ENST00000428425 2220 ntTSL 1 (best)13.05□□□□□ -0.322e-30■■■■□ 24.3
LSM11P83369 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.96□□□□□ -0.332e-30■■■■□ 24.3
LSM11P83369 NCBP2-201ENST00000321256 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.532e-30■■■■□ 24.3
LSM11P83369 NCBP2-210ENST00000467803 771 ntTSL 310.43□□□□□ -0.742e-30■■■■□ 24.3
LSM11P83369 NCBP2-209ENST00000463783 4161 ntTSL 1 (best)8.05□□□□□ -1.122e-30■■■■□ 24.3
LSM11P83369 EEF1D-240ENST00000531770 589 ntTSL 412.54□□□□□ -0.45e-7■■■■□ 24.2
LSM11P83369 PHYKPL-211ENST00000494126 2297 ntTSL 1 (best)23■■□□□ 1.272e-8■■■■□ 24.2
LSM11P83369 PHYKPL-204ENST00000474052 1539 ntTSL 1 (best)20.07■□□□□ 0.82e-8■■■■□ 24.2
LSM11P83369 PHYKPL-209ENST00000489262 2780 ntTSL 219.8■□□□□ 0.762e-8■■■■□ 24.2
LSM11P83369 PHYKPL-210ENST00000493197 1969 ntTSL 216.69■□□□□ 0.262e-8■■■■□ 24.2
LSM11P83369 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.252e-8■■■■□ 24.2
LSM11P83369 PHYKPL-207ENST00000481436 2025 ntTSL 212.79□□□□□ -0.362e-8■■■■□ 24.2
LSM11P83369 PHYKPL-203ENST00000393488 1001 ntTSL 311.56□□□□□ -0.562e-8■■■■□ 24.2
LSM11P83369 PHYKPL-208ENST00000481811 2709 ntTSL 211.5□□□□□ -0.572e-8■■■■□ 24.2
LSM11P83369 PHYKPL-216ENST00000510991 814 ntTSL 39.78□□□□□ -0.842e-8■■■■□ 24.2
LSM11P83369 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.059e-7■■■■□ 24.2
LSM11P83369 PPIH-206ENST00000461351 527 ntTSL 310.36□□□□□ -0.759e-7■■■■□ 24.2
LSM11P83369 SCMH1-207ENST00000372597 3252 ntTSL 1 (best) BASIC10.1□□□□□ -0.799e-7■■■■□ 24.2
LSM11P83369 SCMH1-209ENST00000397174 2977 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.849e-7■■■■□ 24.2
LSM11P83369 SCMH1-201ENST00000326197 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.879e-7■■■■□ 24.2
LSM11P83369 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC9.24□□□□□ -0.939e-7■■■■□ 24.2
LSM11P83369 SCMH1-204ENST00000361705 3115 ntTSL 5 BASIC9.21□□□□□ -0.939e-7■■■■□ 24.2
LSM11P83369 SCMH1-213ENST00000472037 735 ntTSL 38.99□□□□□ -0.979e-7■■■■□ 24.2
LSM11P83369 SCMH1-202ENST00000337495 3108 ntTSL 2 BASIC8.95□□□□□ -0.989e-7■■■■□ 24.2
LSM11P83369 SCMH1-203ENST00000361191 2906 ntTSL 5 BASIC8.84□□□□□ -0.999e-7■■■■□ 24.2
LSM11P83369 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC8.83□□□□□ -19e-7■■■■□ 24.2
LSM11P83369 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.029e-7■■■■□ 24.2
LSM11P83369 SCMH1-211ENST00000456518 1586 ntTSL 2 BASIC8.6□□□□□ -1.039e-7■■■■□ 24.2
LSM11P83369 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC8.43□□□□□ -1.069e-7■■■■□ 24.2
LSM11P83369 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC7.96□□□□□ -1.139e-7■■■■□ 24.2
LSM11P83369 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.915e-6■■■■□ 24.1
LSM11P83369 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.18■□□□□ 0.665e-6■■■■□ 24.1
LSM11P83369 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.043e-10■■■■□ 24.1
LSM11P83369 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.473e-10■■■■□ 24.1
LSM11P83369 ADPGK-213ENST00000569534 2262 ntTSL 217.76■□□□□ 0.433e-10■■■■□ 24.1
LSM11P83369 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.393e-10■■■■□ 24.1
LSM11P83369 SLC22A18-210ENST00000492567 684 ntTSL 216.7■□□□□ 0.263e-10■■■■□ 24.1
LSM11P83369 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.213e-10■■■■□ 24.1
LSM11P83369 ADPGK-210ENST00000567941 2716 ntTSL 1 (best)15.75■□□□□ 0.113e-10■■■■□ 24.1
LSM11P83369 ADPGK-212ENST00000569517 951 ntTSL 515.02■□□□□ -03e-10■■■■□ 24.1
LSM11P83369 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.73□□□□□ -0.053e-10■■■■□ 24.1
LSM11P83369 ADPGK-206ENST00000563907 1041 ntTSL 314.65□□□□□ -0.063e-10■■■■□ 24.1
LSM11P83369 NUTM2B-AS1-210ENST00000600376 510 ntTSL 312.75□□□□□ -0.373e-10■■■■□ 24.1
LSM11P83369 ADPGK-209ENST00000567733 525 ntTSL 512.62□□□□□ -0.393e-10■■■■□ 24.1
LSM11P83369 TRAF3IP2-AS1-202ENST00000438298 1106 ntTSL 212.51□□□□□ -0.413e-10■■■■□ 24.1
LSM11P83369 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC11.41□□□□□ -0.583e-10■■■■□ 24.1
LSM11P83369 TRAF3IP2-AS1-210ENST00000532353 576 ntTSL 211.02□□□□□ -0.653e-10■■■■□ 24.1
LSM11P83369 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC10.68□□□□□ -0.73e-10■■■■□ 24.1
LSM11P83369 TRAF3IP2-AS1-207ENST00000456352 484 ntTSL 5 BASIC9.4□□□□□ -0.93e-10■■■■□ 24.1
LSM11P83369 TRAF3IP2-AS1-205ENST00000442928 548 ntTSL 4 BASIC9.32□□□□□ -0.923e-10■■■■□ 24.1
LSM11P83369 TRAF3IP2-AS1-206ENST00000449449 784 ntTSL 3 BASIC8.17□□□□□ -1.13e-10■■■■□ 24.1
LSM11P83369 TRAF3IP2-AS1-204ENST00000440395 439 ntTSL 37.11□□□□□ -1.273e-10■■■■□ 24.1
LSM11P83369 ADPGK-207ENST00000565814 795 ntTSL 56.98□□□□□ -1.293e-10■■■■□ 24.1
LSM11P83369 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.83□□□□□ -1.323e-10■■■■□ 24.1
LSM11P83369 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.323e-10■■■■□ 24.1
LSM11P83369 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.65□□□□□ -1.353e-10■■■■□ 24.1
LSM11P83369 SAMSN1-205ENST00000493640 282 ntTSL 36.41□□□□□ -1.383e-10■■■■□ 24.1
LSM11P83369 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.223e-7■■■■□ 23.9
LSM11P83369 EEF1D-237ENST00000531281 813 ntTSL 214.93□□□□□ -0.029e-7■■■■□ 23.8
LSM11P83369 EEF1D-239ENST00000531670 926 ntTSL 313.55□□□□□ -0.249e-7■■■■□ 23.8
LSM11P83369 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC11.94□□□□□ -0.55e-7■■■■□ 23.8
LSM11P83369 AC069277.1-204ENST00000342990 246 ntTSL 36.99□□□□□ -1.295e-7■■■■□ 23.8
LSM11P83369 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.18■□□□□ 0.55e-13■■■■□ 23.8
LSM11P83369 SLC11A2-210ENST00000547510 924 ntTSL 517.98■□□□□ 0.475e-13■■■■□ 23.8
LSM11P83369 SLC11A2-221ENST00000550329 622 ntTSL 217.6■□□□□ 0.415e-13■■■■□ 23.8
LSM11P83369 SLC11A2-222ENST00000550714 587 ntTSL 417.17■□□□□ 0.345e-13■■■■□ 23.8
LSM11P83369 SLC11A2-219ENST00000549625 585 ntTSL 516.99■□□□□ 0.315e-13■■■■□ 23.8
LSM11P83369 SLC11A2-211ENST00000547579 581 ntTSL 516.09■□□□□ 0.175e-13■■■■□ 23.8
LSM11P83369 OSGEP-203ENST00000553640 578 ntTSL 315.93■□□□□ 0.142e-11■■■■□ 23.8
LSM11P83369 OSGEP-205ENST00000554699 762 ntTSL 315.6■□□□□ 0.092e-11■■■■□ 23.8
LSM11P83369 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.195e-13■■■■□ 23.8
LSM11P83369 OSGEP-207ENST00000555223 773 ntTSL 512.62□□□□□ -0.392e-11■■■■□ 23.8
LSM11P83369 CCDC82-208ENST00000545264 557 ntTSL 211.9□□□□□ -0.52e-7■■■■□ 23.8
LSM11P83369 SLC11A2-214ENST00000548150 530 ntTSL 411.2□□□□□ -0.625e-13■■■■□ 23.8
LSM11P83369 STK38-201ENST00000229812 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.712e-14■■■■□ 23.8
LSM11P83369 SLC11A2-207ENST00000546636 2125 ntTSL 1 (best)9.96□□□□□ -0.825e-13■■■■□ 23.8
LSM11P83369 SLC11A2-209ENST00000547198 2486 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.885e-13■■■■□ 23.8
LSM11P83369 SLC11A2-224ENST00000550995 551 ntTSL 49.07□□□□□ -0.965e-13■■■■□ 23.8
LSM11P83369 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.995e-13■■■■□ 23.8
LSM11P83369 SLC11A2-206ENST00000546488 569 ntTSL 48.43□□□□□ -1.065e-13■■■■□ 23.8
LSM11P83369 SLC11A2-213ENST00000547732 546 ntTSL 48.18□□□□□ -1.15e-13■■■■□ 23.8
LSM11P83369 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.125e-13■■■■□ 23.8
LSM11P83369 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.275e-13■■■■□ 23.8
LSM11P83369 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.385e-13■■■■□ 23.8
LSM11P83369 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.532e-7■■■■□ 23.8
LSM11P83369 SLC11A2-215ENST00000548193 576 ntTSL 35.45□□□□□ -1.545e-13■■■■□ 23.8
LSM11P83369 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 13e-7■■■■□ 23.8
LSM11P83369 TSPAN32-214ENST00000493924 1573 ntTSL 517.31■□□□□ 0.362e-6■■■■□ 23.7
LSM11P83369 TSPAN32-210ENST00000483227 886 ntTSL 1 (best)16.93■□□□□ 0.32e-6■■■■□ 23.7
LSM11P83369 TSPAN32-216ENST00000498313 988 ntTSL 516.76■□□□□ 0.272e-6■■■■□ 23.7
LSM11P83369 TSPAN32-203ENST00000381117 798 ntTSL 1 (best)16.6■□□□□ 0.252e-6■■■■□ 23.7
LSM11P83369 TSPAN32-209ENST00000479508 741 ntTSL 216.6■□□□□ 0.252e-6■■■■□ 23.7
LSM11P83369 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.12e-6■■■■□ 23.7
LSM11P83369 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.7■□□□□ 0.12e-6■■■■□ 23.7
LSM11P83369 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.022e-6■■■■□ 23.7
LSM11P83369 TSPAN32-202ENST00000339046 1202 ntTSL 214.95□□□□□ -0.022e-6■■■■□ 23.7
Retrieved 100 of 11,495 protein–RNA pairs in 58.4 ms