RNA–Protein interactions for RNA: ENST00000545264.1

CCDC82-208, Transcript of coiled-coil domain containing 82, humanhuman

TSL 2

Gene CCDC82, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82-208ENST00000545264 AEBP2Q6ZN18 517 aaPredicted RBP28.04■■■□□ 2.08
CCDC82-208ENST00000545264 CHIC1Q5VXU3 224 aa26.42■■□□□ 1.82
CCDC82-208ENST00000545264 SENP3Q9H4L4 574 aaPredicted RBP24.22■■□□□ 1.47
CCDC82-208ENST00000545264 PHF23Q9BUL5 403 aaPredicted RBP23.73■■□□□ 1.39
CCDC82-208ENST00000545264 FOXD1Q16676 465 aa22.55■■□□□ 1.2
CCDC82-208ENST00000545264 POTEDQ86YR6 584 aa22.08■■□□□ 1.13
CCDC82-208ENST00000545264 MSH5O43196 834 aa21.51■■□□□ 1.03
CCDC82-208ENST00000545264 PLPPR3Q6T4P5 718 aa21.09■□□□□ 0.97
CCDC82-208ENST00000545264 PIAS4Q8N2W9 510 aaPredicted RBP20.98■□□□□ 0.95
CCDC82-208ENST00000545264 PPP6R1Q9UPN7 881 aa20.47■□□□□ 0.87
CCDC82-208ENST00000545264 ADRA2BP18089 450 aa20.41■□□□□ 0.86
CCDC82-208ENST00000545264 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
CCDC82-208ENST00000545264 MAPK8IP2Q13387 824 aaPredicted RBP18.93■□□□□ 0.62
CCDC82-208ENST00000545264 SCAF1Q9H7N4 1312 aaKnown RBP18.89■□□□□ 0.61
CCDC82-208ENST00000545264 CACNB1Q02641 598 aaPredicted RBP18.88■□□□□ 0.61
CCDC82-208ENST00000545264 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
CCDC82-208ENST00000545264 DCAF8L1A6NGE4 600 aa18.38■□□□□ 0.53
CCDC82-208ENST00000545264 RNF39Q9H2S5 420 aa18.2■□□□□ 0.5
CCDC82-208ENST00000545264 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.48
CCDC82-208ENST00000545264 CNKSR2Q8WXI2 1034 aa18.06■□□□□ 0.48
CCDC82-208ENST00000545264 KCNA4P22459 653 aa18.05■□□□□ 0.48
CCDC82-208ENST00000545264 HOXD11P31277 338 aaPredicted RBP18.05■□□□□ 0.48
CCDC82-208ENST00000545264 C1QBPQ07021 282 aaKnown RBP17.98■□□□□ 0.47
CCDC82-208ENST00000545264 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
CCDC82-208ENST00000545264 RNF216Q9NWF9 866 aaPredicted RBP17.77■□□□□ 0.44
CCDC82-208ENST00000545264 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.41
CCDC82-208ENST00000545264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCDC82-208ENST00000545264 POTEHQ6S545 545 aa17.22■□□□□ 0.35
CCDC82-208ENST00000545264 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
CCDC82-208ENST00000545264 CAPN15O75808 1086 aa16.8■□□□□ 0.28
CCDC82-208ENST00000545264 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
CCDC82-208ENST00000545264 DSG3P32926 999 aa16.8■□□□□ 0.28
CCDC82-208ENST00000545264 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
CCDC82-208ENST00000545264 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
CCDC82-208ENST00000545264 FOXD4L1Q9NU39 408 aa16.66■□□□□ 0.26
CCDC82-208ENST00000545264 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
CCDC82-208ENST00000545264 ZBTB22O15209 634 aa16.6■□□□□ 0.25
CCDC82-208ENST00000545264 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
CCDC82-208ENST00000545264 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
CCDC82-208ENST00000545264 APLP2Q06481 763 aa16.43■□□□□ 0.22
CCDC82-208ENST00000545264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.36■□□□□ 0.21
CCDC82-208ENST00000545264 HNRNPUL2Q1KMD3 747 aaKnown RBP16.36■□□□□ 0.21
CCDC82-208ENST00000545264 TRHP20396 242 aaPredicted RBP16.35■□□□□ 0.21
CCDC82-208ENST00000545264 ZNF219Q9P2Y4 722 aaPredicted RBP16.34■□□□□ 0.21
CCDC82-208ENST00000545264 ABCB7O75027 752 aa16.29■□□□□ 0.2
CCDC82-208ENST00000545264 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
CCDC82-208ENST00000545264 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
CCDC82-208ENST00000545264 ATXN8OSP0DMR3 200 aa16.08■□□□□ 0.16
CCDC82-208ENST00000545264 CHRDL2Q6WN34 429 aa16.03■□□□□ 0.16
CCDC82-208ENST00000545264 ATF5Q9Y2D1 282 aaPredicted RBP15.98■□□□□ 0.15
CCDC82-208ENST00000545264 SP7Q8TDD2 431 aaPredicted RBP15.82■□□□□ 0.12
CCDC82-208ENST00000545264 POLA2Q14181 598 aa15.73■□□□□ 0.11
CCDC82-208ENST00000545264 AKT1S1Q96B36 256 aa15.6■□□□□ 0.09
CCDC82-208ENST00000545264 ZBTB12Q9Y330 459 aaPredicted RBP15.48■□□□□ 0.07
CCDC82-208ENST00000545264 HAX1O00165 279 aa15.45■□□□□ 0.06
CCDC82-208ENST00000545264 PIP4P2Q8N4L2 257 aa15.45■□□□□ 0.06
CCDC82-208ENST00000545264 REM2Q8IYK8 340 aaPredicted RBP15.41■□□□□ 0.06
CCDC82-208ENST00000545264 FBLN2P98095 1184 aa15.37■□□□□ 0.05
CCDC82-208ENST00000545264 MKRN4PQ13434 485 aaPredicted RBP15.29■□□□□ 0.04
CCDC82-208ENST00000545264 FXR2P51116 673 aaKnown RBP eCLIP15.25■□□□□ 0.03
CCDC82-208ENST00000545264 PITPNM1O00562 1244 aa15.23■□□□□ 0.03
CCDC82-208ENST00000545264 OSCARQ8IYS5 282 aa15.22■□□□□ 0.03
CCDC82-208ENST00000545264 EVX2Q03828 476 aa15.03■□□□□ -0
CCDC82-208ENST00000545264 SPDYE2BA6NHP3 402 aa15.02■□□□□ -0
CCDC82-208ENST00000545264 SPDYE6P0CI01 402 aa15.02■□□□□ -0
CCDC82-208ENST00000545264 SPDYE2Q495Y8 402 aa15.02■□□□□ -0
CCDC82-208ENST00000545264 SPDYE4A6NLX3 237 aa14.95□□□□□ -0.02
CCDC82-208ENST00000545264 ZNF692Q9BU19 519 aaPredicted RBP14.95□□□□□ -0.02
CCDC82-208ENST00000545264 FKBP8Q14318 412 aa14.91□□□□□ -0.02
CCDC82-208ENST00000545264 SSUH2Q9Y2M2 353 aa14.89□□□□□ -0.03
CCDC82-208ENST00000545264 PRKAR2AP13861 404 aaKnown RBP14.88□□□□□ -0.03
CCDC82-208ENST00000545264 LHX8Q68G74 356 aa14.82□□□□□ -0.04
CCDC82-208ENST00000545264 SPDYE1Q8NFV5 336 aaPredicted RBP14.81□□□□□ -0.04
CCDC82-208ENST00000545264 CLEC11AQ9Y240 323 aa14.8□□□□□ -0.04
CCDC82-208ENST00000545264 C19orf67A6NJJ6 358 aa14.79□□□□□ -0.04
CCDC82-208ENST00000545264 GABBR2O75899 941 aa14.75□□□□□ -0.05
CCDC82-208ENST00000545264 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
CCDC82-208ENST00000545264 PROM2Q8N271 834 aa14.68□□□□□ -0.06
CCDC82-208ENST00000545264 PLSCR2Q9NRY7 297 aa14.51□□□□□ -0.09
CCDC82-208ENST00000545264 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
CCDC82-208ENST00000545264 CHADLQ6NUI6 762 aa14.5□□□□□ -0.09
CCDC82-208ENST00000545264 PRR29P0C7W0 189 aa14.47□□□□□ -0.09
CCDC82-208ENST00000545264 CLCN6P51797 869 aa14.44□□□□□ -0.1
CCDC82-208ENST00000545264 FBXO3Q9UK99 471 aa14.41□□□□□ -0.1
CCDC82-208ENST00000545264 CD44P16070 742 aaKnown RBP14.38□□□□□ -0.11
CCDC82-208ENST00000545264 POTEIP0CG38 1075 aa14.34□□□□□ -0.11
CCDC82-208ENST00000545264 DCBLD2Q96PD2 775 aa14.31□□□□□ -0.12
CCDC82-208ENST00000545264 FARP1Q9Y4F1 1045 aaPredicted RBP14.26□□□□□ -0.13
CCDC82-208ENST00000545264 VASPP50552 380 aaPredicted RBP14.2□□□□□ -0.14
CCDC82-208ENST00000545264 MIER1Q8N108 512 aa14.18□□□□□ -0.14
CCDC82-208ENST00000545264 CREBZFQ9NS37 354 aa14.18□□□□□ -0.14
CCDC82-208ENST00000545264 PLCD3Q8N3E9 789 aa14.17□□□□□ -0.14
CCDC82-208ENST00000545264 PLEKHG5O94827 1062 aa14.15□□□□□ -0.14
CCDC82-208ENST00000545264 ZNF579Q8NAF0 562 aaKnown RBP14.1□□□□□ -0.15
CCDC82-208ENST00000545264 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
CCDC82-208ENST00000545264 ZBTB47Q9UFB7 747 aaPredicted RBP14.03□□□□□ -0.16
CCDC82-208ENST00000545264 MNX1P50219 401 aaPredicted RBP14.01□□□□□ -0.17
CCDC82-208ENST00000545264 POTEMA6NI47 508 aa14□□□□□ -0.17
CCDC82-208ENST00000545264 OTUD5Q96G74 571 aa14□□□□□ -0.17
CCDC82-208ENST00000545264 IFNLR1Q8IU57 520 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms