RNA–Protein interactions for RNA: ENST00000493640.1

SAMSN1-205, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 3

Gene SAMSN1, Length 282 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-205ENST00000493640 AEBP2Q6ZN18 517 aaPredicted RBP15.28■□□□□ 0.04
SAMSN1-205ENST00000493640 CHIC1Q5VXU3 224 aa14.35□□□□□ -0.11
SAMSN1-205ENST00000493640 SENP3Q9H4L4 574 aaPredicted RBP13.19□□□□□ -0.3
SAMSN1-205ENST00000493640 SLC24A1O60721 1099 aa13□□□□□ -0.33
SAMSN1-205ENST00000493640 PHF23Q9BUL5 403 aaPredicted RBP12.88□□□□□ -0.35
SAMSN1-205ENST00000493640 FOXD1Q16676 465 aa12.3□□□□□ -0.44
SAMSN1-205ENST00000493640 POTEDQ86YR6 584 aa12.27□□□□□ -0.45
SAMSN1-205ENST00000493640 DAXXQ9UER7 740 aaPredicted RBP11.92□□□□□ -0.5
SAMSN1-205ENST00000493640 MSH5O43196 834 aa11.77□□□□□ -0.53
SAMSN1-205ENST00000493640 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
SAMSN1-205ENST00000493640 NCBP3Q53F19 620 aaKnown RBP11.7□□□□□ -0.54
SAMSN1-205ENST00000493640 TTBK1Q5TCY1 1321 aaPredicted RBP11.63□□□□□ -0.55
SAMSN1-205ENST00000493640 PLPPR3Q6T4P5 718 aa11.56□□□□□ -0.56
SAMSN1-205ENST00000493640 RTN4Q9NQC3 1192 aaKnown RBP11.56□□□□□ -0.56
SAMSN1-205ENST00000493640 MYT1Q01538 1121 aa11.52□□□□□ -0.57
SAMSN1-205ENST00000493640 APLP2Q06481 763 aa11.45□□□□□ -0.58
SAMSN1-205ENST00000493640 AMER1Q5JTC6 1135 aaPredicted RBP11.43□□□□□ -0.58
SAMSN1-205ENST00000493640 PELP1Q8IZL8 1130 aaKnown RBP11.37□□□□□ -0.59
SAMSN1-205ENST00000493640 PIAS4Q8N2W9 510 aaPredicted RBP11.37□□□□□ -0.59
SAMSN1-205ENST00000493640 ARXQ96QS3 562 aa11.27□□□□□ -0.61
SAMSN1-205ENST00000493640 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
SAMSN1-205ENST00000493640 ERICH6Q7L0X2 663 aa11.19□□□□□ -0.62
SAMSN1-205ENST00000493640 KCNA4P22459 653 aa11.15□□□□□ -0.62
SAMSN1-205ENST00000493640 CSRNP3Q8WYN3 585 aa11.1□□□□□ -0.63
SAMSN1-205ENST00000493640 PPP6R1Q9UPN7 881 aa11.07□□□□□ -0.64
SAMSN1-205ENST00000493640 ADRA2BP18089 450 aa11□□□□□ -0.65
SAMSN1-205ENST00000493640 TIMELESSQ9UNS1 1208 aa10.95□□□□□ -0.66
SAMSN1-205ENST00000493640 TAOK2Q9UL54 1235 aa10.82□□□□□ -0.68
SAMSN1-205ENST00000493640 HOMEZQ8IX15 550 aa10.81□□□□□ -0.68
SAMSN1-205ENST00000493640 RANGAP1P46060 587 aaPredicted RBP10.78□□□□□ -0.68
SAMSN1-205ENST00000493640 TULP1O00294 542 aaPredicted RBP10.73□□□□□ -0.69
SAMSN1-205ENST00000493640 BCANQ96GW7 911 aa10.7□□□□□ -0.7
SAMSN1-205ENST00000493640 KLHL34Q8N239 644 aa10.58□□□□□ -0.72
SAMSN1-205ENST00000493640 EIF5BO60841 1220 aaKnown RBP10.55□□□□□ -0.72
SAMSN1-205ENST00000493640 TPRNQ4KMQ1 711 aa10.54□□□□□ -0.72
SAMSN1-205ENST00000493640 GTF3C3Q9Y5Q9 886 aa10.5□□□□□ -0.73
SAMSN1-205ENST00000493640 PLCB2Q00722 1185 aa10.48□□□□□ -0.73
SAMSN1-205ENST00000493640 PODXL2Q9NZ53 605 aa10.48□□□□□ -0.73
SAMSN1-205ENST00000493640 SLC4A1APQ9BWU0 796 aaKnown RBP10.44□□□□□ -0.74
SAMSN1-205ENST00000493640 DMRT2Q9Y5R5 561 aa10.37□□□□□ -0.75
SAMSN1-205ENST00000493640 CACNB1Q02641 598 aaPredicted RBP10.33□□□□□ -0.76
SAMSN1-205ENST00000493640 FBXO3Q9UK99 471 aa10.32□□□□□ -0.76
SAMSN1-205ENST00000493640 NPM2Q86SE8 214 aaKnown RBP10.29□□□□□ -0.76
SAMSN1-205ENST00000493640 TMEM132AQ24JP5 1023 aa10.27□□□□□ -0.77
SAMSN1-205ENST00000493640 HAP1P54257 671 aaPredicted RBP10.23□□□□□ -0.77
SAMSN1-205ENST00000493640 MAPK8IP2Q13387 824 aaPredicted RBP10.23□□□□□ -0.77
SAMSN1-205ENST00000493640 VSIG10Q8N0Z9 540 aa10.22□□□□□ -0.77
SAMSN1-205ENST00000493640 SCAF1Q9H7N4 1312 aaKnown RBP10.17□□□□□ -0.78
SAMSN1-205ENST00000493640 PLEKHG5O94827 1062 aa10.1□□□□□ -0.79
SAMSN1-205ENST00000493640 C14orf37Q86TY3 774 aa10.1□□□□□ -0.79
SAMSN1-205ENST00000493640 TRIM26Q12899 539 aaPredicted RBP10.05□□□□□ -0.8
SAMSN1-205ENST00000493640 ZBTB22O15209 634 aa10.04□□□□□ -0.8
SAMSN1-205ENST00000493640 KDM2AQ9Y2K7 1162 aa9.99□□□□□ -0.81
SAMSN1-205ENST00000493640 LOC105371045A0A1W2PR82 267 aa9.98□□□□□ -0.81
SAMSN1-205ENST00000493640 HRCP23327 699 aa9.97□□□□□ -0.81
SAMSN1-205ENST00000493640 RNF39Q9H2S5 420 aa9.97□□□□□ -0.81
SAMSN1-205ENST00000493640 DCAF8L2P0C7V8 631 aa9.92□□□□□ -0.82
SAMSN1-205ENST00000493640 BCL11AQ9H165 835 aa9.89□□□□□ -0.83
SAMSN1-205ENST00000493640 DCAF8L1A6NGE4 600 aa9.86□□□□□ -0.83
SAMSN1-205ENST00000493640 UBTFP17480 764 aaKnown RBP9.85□□□□□ -0.83
SAMSN1-205ENST00000493640 SUPT5HO00267 1087 aaKnown RBP9.84□□□□□ -0.83
SAMSN1-205ENST00000493640 C1QBPQ07021 282 aaKnown RBP9.83□□□□□ -0.84
SAMSN1-205ENST00000493640 HOXD11P31277 338 aaPredicted RBP9.82□□□□□ -0.84
SAMSN1-205ENST00000493640 FKBP8Q14318 412 aa9.82□□□□□ -0.84
SAMSN1-205ENST00000493640 PDIA4P13667 645 aaKnown RBP9.81□□□□□ -0.84
SAMSN1-205ENST00000493640 FBLN2P98095 1184 aa9.8□□□□□ -0.84
SAMSN1-205ENST00000493640 CNKSR2Q8WXI2 1034 aa9.79□□□□□ -0.84
SAMSN1-205ENST00000493640 UBE2Q2Q8WVN8 375 aa9.75□□□□□ -0.85
SAMSN1-205ENST00000493640 SHROOM4Q9ULL8 1493 aa9.73□□□□□ -0.85
SAMSN1-205ENST00000493640 CDK11AQ9UQ88 783 aaPredicted RBP9.73□□□□□ -0.85
SAMSN1-205ENST00000493640 CHMP4AQ9BY43 222 aa9.71□□□□□ -0.86
SAMSN1-205ENST00000493640 SAMD1Q6SPF0 538 aaPredicted RBP9.7□□□□□ -0.86
SAMSN1-205ENST00000493640 DNAJC5BQ9UF47 199 aa9.67□□□□□ -0.86
SAMSN1-205ENST00000493640 HMGB1P09429 215 aaKnown RBP9.65□□□□□ -0.86
SAMSN1-205ENST00000493640 CDK11BP21127 795 aaKnown RBP9.65□□□□□ -0.86
SAMSN1-205ENST00000493640 NPM3O75607 178 aaKnown RBP9.64□□□□□ -0.87
SAMSN1-205ENST00000493640 FAM9AQ8IZU1 332 aaPredicted RBP9.64□□□□□ -0.87
SAMSN1-205ENST00000493640 BRD2P25440 801 aaKnown RBP9.63□□□□□ -0.87
SAMSN1-205ENST00000493640 RNF216Q9NWF9 866 aaPredicted RBP9.6□□□□□ -0.87
SAMSN1-205ENST00000493640 IGSF3O75054 1194 aa9.59□□□□□ -0.87
SAMSN1-205ENST00000493640 HSP90B1P14625 803 aaKnown RBP9.59□□□□□ -0.87
SAMSN1-205ENST00000493640 PPP4R3CPQ6ZMV5 832 aa9.57□□□□□ -0.88
SAMSN1-205ENST00000493640 CCDC9Q9Y3X0 531 aaKnown RBP9.57□□□□□ -0.88
SAMSN1-205ENST00000493640 PDE4CQ08493 712 aa9.54□□□□□ -0.88
SAMSN1-205ENST00000493640 PUS7Q96PZ0 661 aaKnown RBP9.54□□□□□ -0.88
SAMSN1-205ENST00000493640 TAF7LQ5H9L4 462 aa9.53□□□□□ -0.88
SAMSN1-205ENST00000493640 POTEHQ6S545 545 aa9.53□□□□□ -0.88
SAMSN1-205ENST00000493640 NBR1Q14596 966 aa9.49□□□□□ -0.89
SAMSN1-205ENST00000493640 DHX37Q8IY37 1157 aaKnown RBP9.45□□□□□ -0.9
SAMSN1-205ENST00000493640 DNAJC5Q9H3Z4 198 aa9.45□□□□□ -0.9
SAMSN1-205ENST00000493640 FOXD4L1Q9NU39 408 aa9.45□□□□□ -0.9
SAMSN1-205ENST00000493640 NEFLP07196 543 aa9.44□□□□□ -0.9
SAMSN1-205ENST00000493640 BBXQ8WY36 941 aaPredicted RBP9.43□□□□□ -0.9
SAMSN1-205ENST00000493640 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.4□□□□□ -0.9
SAMSN1-205ENST00000493640 PAXIP1Q6ZW49 1069 aaPredicted RBP9.39□□□□□ -0.91
SAMSN1-205ENST00000493640 TSHZ2Q9NRE2 1034 aa9.39□□□□□ -0.91
SAMSN1-205ENST00000493640 ZBTB7CA1YPR0 619 aa9.37□□□□□ -0.91
SAMSN1-205ENST00000493640 NECTIN2Q92692 538 aa9.35□□□□□ -0.91
SAMSN1-205ENST00000493640 PKNOX2Q96KN3 472 aa9.33□□□□□ -0.92
SAMSN1-205ENST00000493640 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms