Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
PDE1AP54750 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
PDE1AP54750 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE1AP54750 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE1AP54750 AL022069.1-201ENST00000568025 1636 ntBASIC28.21■■■□□ 2.11
PDE1AP54750 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE1AP54750 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC28.2■■■□□ 2.11
PDE1AP54750 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
PDE1AP54750 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PDE1AP54750 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC28.2■■■□□ 2.1
PDE1AP54750 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC28.2■■■□□ 2.1
PDE1AP54750 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
PDE1AP54750 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
PDE1AP54750 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PDE1AP54750 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PDE1AP54750 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE1AP54750 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE1AP54750 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE1AP54750 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE1AP54750 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE1AP54750 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PDE1AP54750 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC28.18■■■□□ 2.1
PDE1AP54750 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.18■■■□□ 2.1
PDE1AP54750 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PDE1AP54750 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PDE1AP54750 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PDE1AP54750 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
PDE1AP54750 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.18■■■□□ 2.1
PDE1AP54750 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PDE1AP54750 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.17■■■□□ 2.1
PDE1AP54750 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC28.16■■■□□ 2.1
PDE1AP54750 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE1AP54750 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE1AP54750 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE1AP54750 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC28.16■■■□□ 2.1
PDE1AP54750 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE1AP54750 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PDE1AP54750 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
PDE1AP54750 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.15■■■□□ 2.1
PDE1AP54750 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
PDE1AP54750 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.15■■■□□ 2.1
PDE1AP54750 AL031848.2-201ENST00000607670 837 ntBASIC28.15■■■□□ 2.1
PDE1AP54750 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
PDE1AP54750 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PDE1AP54750 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
PDE1AP54750 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC28.14■■■□□ 2.1
PDE1AP54750 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.14■■■□□ 2.1
PDE1AP54750 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC28.14■■■□□ 2.09
PDE1AP54750 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PDE1AP54750 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PDE1AP54750 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDE1AP54750 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.13■■■□□ 2.09
PDE1AP54750 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.13■■■□□ 2.09
PDE1AP54750 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDE1AP54750 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDE1AP54750 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PDE1AP54750 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDE1AP54750 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PDE1AP54750 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDE1AP54750 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
PDE1AP54750 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDE1AP54750 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.12■■■□□ 2.09
PDE1AP54750 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.12■■■□□ 2.09
PDE1AP54750 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PDE1AP54750 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.12■■■□□ 2.09
PDE1AP54750 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PDE1AP54750 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC28.12■■■□□ 2.09
PDE1AP54750 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
PDE1AP54750 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PDE1AP54750 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.11■■■□□ 2.09
PDE1AP54750 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PDE1AP54750 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
PDE1AP54750 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PDE1AP54750 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC28.1■■■□□ 2.09
PDE1AP54750 RARRES2P1-201ENST00000474487 481 ntBASIC28.1■■■□□ 2.09
PDE1AP54750 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC28.1■■■□□ 2.09
PDE1AP54750 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.1■■■□□ 2.09
PDE1AP54750 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.1■■■□□ 2.09
PDE1AP54750 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PDE1AP54750 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
PDE1AP54750 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC28.09■■■□□ 2.09
PDE1AP54750 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
PDE1AP54750 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PDE1AP54750 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC28.09■■■□□ 2.09
PDE1AP54750 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PDE1AP54750 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PDE1AP54750 AC137630.3-201ENST00000607245 391 ntBASIC28.09■■■□□ 2.09
PDE1AP54750 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PDE1AP54750 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PDE1AP54750 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PDE1AP54750 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PDE1AP54750 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PDE1AP54750 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.08■■■□□ 2.09
PDE1AP54750 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC28.08■■■□□ 2.09
PDE1AP54750 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC28.08■■■□□ 2.09
PDE1AP54750 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PDE1AP54750 PRTG-204ENST00000561292 833 ntTSL 3 BASIC28.07■■■□□ 2.08
PDE1AP54750 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.07■■■□□ 2.08
PDE1AP54750 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PDE1AP54750 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms