Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
PDE1AP54750 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
PDE1AP54750 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE1AP54750 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE1AP54750 AL022069.1-201ENST00000568025 1636 ntBASIC28.21■■■□□ 2.11
PDE1AP54750 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE1AP54750 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC28.2■■■□□ 2.11
PDE1AP54750 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
PDE1AP54750 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PDE1AP54750 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC28.2■■■□□ 2.1
PDE1AP54750 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC28.2■■■□□ 2.1
PDE1AP54750 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
PDE1AP54750 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
PDE1AP54750 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PDE1AP54750 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PDE1AP54750 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE1AP54750 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE1AP54750 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE1AP54750 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE1AP54750 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE1AP54750 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PDE1AP54750 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC28.18■■■□□ 2.1
PDE1AP54750 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.18■■■□□ 2.1
PDE1AP54750 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PDE1AP54750 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PDE1AP54750 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PDE1AP54750 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
PDE1AP54750 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.18■■■□□ 2.1
PDE1AP54750 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PDE1AP54750 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.17■■■□□ 2.1
PDE1AP54750 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC28.16■■■□□ 2.1
PDE1AP54750 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE1AP54750 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE1AP54750 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE1AP54750 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC28.16■■■□□ 2.1
PDE1AP54750 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE1AP54750 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PDE1AP54750 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
PDE1AP54750 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.15■■■□□ 2.1
PDE1AP54750 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
PDE1AP54750 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.15■■■□□ 2.1
PDE1AP54750 AL031848.2-201ENST00000607670 837 ntBASIC28.15■■■□□ 2.1
PDE1AP54750 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
PDE1AP54750 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PDE1AP54750 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
PDE1AP54750 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC28.14■■■□□ 2.1
PDE1AP54750 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.14■■■□□ 2.1
PDE1AP54750 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC28.14■■■□□ 2.09
PDE1AP54750 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PDE1AP54750 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PDE1AP54750 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDE1AP54750 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.13■■■□□ 2.09
PDE1AP54750 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.13■■■□□ 2.09
PDE1AP54750 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDE1AP54750 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDE1AP54750 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PDE1AP54750 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDE1AP54750 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PDE1AP54750 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDE1AP54750 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
PDE1AP54750 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDE1AP54750 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.12■■■□□ 2.09
PDE1AP54750 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.12■■■□□ 2.09
PDE1AP54750 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PDE1AP54750 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.12■■■□□ 2.09
PDE1AP54750 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PDE1AP54750 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC28.12■■■□□ 2.09
PDE1AP54750 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
PDE1AP54750 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PDE1AP54750 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.11■■■□□ 2.09
PDE1AP54750 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PDE1AP54750 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
PDE1AP54750 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PDE1AP54750 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC28.1■■■□□ 2.09
PDE1AP54750 RARRES2P1-201ENST00000474487 481 ntBASIC28.1■■■□□ 2.09
PDE1AP54750 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC28.1■■■□□ 2.09
PDE1AP54750 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.1■■■□□ 2.09
PDE1AP54750 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.1■■■□□ 2.09
PDE1AP54750 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PDE1AP54750 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
PDE1AP54750 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC28.09■■■□□ 2.09
PDE1AP54750 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
PDE1AP54750 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PDE1AP54750 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC28.09■■■□□ 2.09
PDE1AP54750 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PDE1AP54750 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PDE1AP54750 AC137630.3-201ENST00000607245 391 ntBASIC28.09■■■□□ 2.09
PDE1AP54750 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PDE1AP54750 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PDE1AP54750 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PDE1AP54750 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PDE1AP54750 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PDE1AP54750 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.08■■■□□ 2.09
PDE1AP54750 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC28.08■■■□□ 2.09
PDE1AP54750 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC28.08■■■□□ 2.09
PDE1AP54750 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PDE1AP54750 PRTG-204ENST00000561292 833 ntTSL 3 BASIC28.07■■■□□ 2.08
PDE1AP54750 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.07■■■□□ 2.08
PDE1AP54750 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PDE1AP54750 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms