Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.08■□□□□ 0.97
HMGA2P52926 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.08■□□□□ 0.97
HMGA2P52926 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
HMGA2P52926 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HMGA2P52926 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
HMGA2P52926 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HMGA2P52926 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.07■□□□□ 0.96
HMGA2P52926 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGA2P52926 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGA2P52926 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.07■□□□□ 0.96
HMGA2P52926 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGA2P52926 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.06■□□□□ 0.96
HMGA2P52926 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGA2P52926 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGA2P52926 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.06■□□□□ 0.96
HMGA2P52926 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HMGA2P52926 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGA2P52926 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.06■□□□□ 0.96
HMGA2P52926 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HMGA2P52926 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HMGA2P52926 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGA2P52926 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGA2P52926 RPS2P7-201ENST00000447334 885 ntBASIC21.05■□□□□ 0.96
HMGA2P52926 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGA2P52926 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
HMGA2P52926 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
HMGA2P52926 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.05■□□□□ 0.96
HMGA2P52926 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.05■□□□□ 0.96
HMGA2P52926 AC009831.1-201ENST00000580420 1582 ntBASIC21.05■□□□□ 0.96
HMGA2P52926 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
HMGA2P52926 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.05■□□□□ 0.96
HMGA2P52926 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HMGA2P52926 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGA2P52926 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGA2P52926 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGA2P52926 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
HMGA2P52926 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
HMGA2P52926 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMGA2P52926 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HMGA2P52926 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.04■□□□□ 0.96
HMGA2P52926 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGA2P52926 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.04■□□□□ 0.96
HMGA2P52926 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGA2P52926 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HMGA2P52926 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HMGA2P52926 AC233723.2-201ENST00000623798 2106 ntBASIC21.04■□□□□ 0.96
HMGA2P52926 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGA2P52926 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGA2P52926 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMGA2P52926 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HMGA2P52926 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HMGA2P52926 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGA2P52926 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HMGA2P52926 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMGA2P52926 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMGA2P52926 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.03■□□□□ 0.96
HMGA2P52926 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGA2P52926 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.02■□□□□ 0.96
HMGA2P52926 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.02■□□□□ 0.96
HMGA2P52926 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGA2P52926 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
HMGA2P52926 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.02■□□□□ 0.96
HMGA2P52926 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
HMGA2P52926 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
HMGA2P52926 AC133552.2-201ENST00000619106 1032 ntBASIC21.02■□□□□ 0.96
HMGA2P52926 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
HMGA2P52926 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGA2P52926 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGA2P52926 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGA2P52926 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGA2P52926 GPX1-201ENST00000419349 1106 ntBASIC21.01■□□□□ 0.95
HMGA2P52926 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGA2P52926 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGA2P52926 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HMGA2P52926 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGA2P52926 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.01■□□□□ 0.95
HMGA2P52926 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGA2P52926 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGA2P52926 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21■□□□□ 0.95
HMGA2P52926 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21■□□□□ 0.95
HMGA2P52926 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21■□□□□ 0.95
HMGA2P52926 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGA2P52926 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
HMGA2P52926 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HMGA2P52926 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
HMGA2P52926 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HMGA2P52926 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HMGA2P52926 AL592295.1-201ENST00000400984 884 ntBASIC20.99■□□□□ 0.95
HMGA2P52926 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.99■□□□□ 0.95
HMGA2P52926 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HMGA2P52926 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGA2P52926 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGA2P52926 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HMGA2P52926 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGA2P52926 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.98■□□□□ 0.95
HMGA2P52926 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMGA2P52926 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HMGA2P52926 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
HMGA2P52926 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGA2P52926 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms