Protein–RNA interactions for Protein: P20340

RAB6A, Ras-related protein Rab-6A, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6AP20340 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.69■□□□□ 0.74
RAB6AP20340 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6AP20340 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RAB6AP20340 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6AP20340 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB6AP20340 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6AP20340 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6AP20340 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6AP20340 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6AP20340 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6AP20340 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB6AP20340 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB6AP20340 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6AP20340 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RAB6AP20340 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6AP20340 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6AP20340 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6AP20340 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.68■□□□□ 0.74
RAB6AP20340 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB6AP20340 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6AP20340 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB6AP20340 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RAB6AP20340 AC092068.2-201ENST00000590491 1708 ntBASIC19.68■□□□□ 0.74
RAB6AP20340 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RAB6AP20340 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6AP20340 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6AP20340 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RAB6AP20340 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RAB6AP20340 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB6AP20340 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB6AP20340 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6AP20340 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6AP20340 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB6AP20340 AL161729.1-201ENST00000604104 1402 ntBASIC19.67■□□□□ 0.74
RAB6AP20340 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB6AP20340 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6AP20340 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6AP20340 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RAB6AP20340 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6AP20340 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6AP20340 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6AP20340 AC007029.1-201ENST00000604183 313 ntBASIC19.66■□□□□ 0.74
RAB6AP20340 RAP2CP1-202ENST00000605179 643 ntBASIC19.66■□□□□ 0.74
RAB6AP20340 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6AP20340 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
RAB6AP20340 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RAB6AP20340 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6AP20340 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB6AP20340 AC233723.2-201ENST00000623798 2106 ntBASIC19.66■□□□□ 0.74
RAB6AP20340 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RAB6AP20340 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6AP20340 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6AP20340 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6AP20340 DUSP8P3-201ENST00000399571 1760 ntBASIC19.65■□□□□ 0.74
RAB6AP20340 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6AP20340 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB6AP20340 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6AP20340 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6AP20340 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RAB6AP20340 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
RAB6AP20340 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6AP20340 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB6AP20340 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6AP20340 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6AP20340 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RAB6AP20340 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB6AP20340 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
RAB6AP20340 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB6AP20340 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB6AP20340 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB6AP20340 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB6AP20340 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.64■□□□□ 0.73
RAB6AP20340 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RAB6AP20340 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB6AP20340 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RAB6AP20340 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB6AP20340 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB6AP20340 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB6AP20340 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAB6AP20340 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB6AP20340 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB6AP20340 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RAB6AP20340 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.63■□□□□ 0.73
RAB6AP20340 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB6AP20340 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB6AP20340 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB6AP20340 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
RAB6AP20340 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB6AP20340 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB6AP20340 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB6AP20340 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.62■□□□□ 0.73
RAB6AP20340 AC026202.3-201ENST00000600805 1127 ntBASIC19.62■□□□□ 0.73
RAB6AP20340 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RAB6AP20340 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB6AP20340 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB6AP20340 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB6AP20340 CLDN5-201ENST00000403084 2357 ntBASIC19.62■□□□□ 0.73
RAB6AP20340 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6AP20340 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6AP20340 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms