Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1DP16402 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1DP16402 ANOS2P-203ENST00000472227 1816 ntBASIC19.49■□□□□ 0.71
HIST1H1DP16402 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1DP16402 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.49■□□□□ 0.71
HIST1H1DP16402 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1DP16402 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
HIST1H1DP16402 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1DP16402 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1DP16402 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1DP16402 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1DP16402 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1DP16402 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H1DP16402 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.48■□□□□ 0.71
HIST1H1DP16402 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.48■□□□□ 0.71
HIST1H1DP16402 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H1DP16402 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H1DP16402 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H1DP16402 MIR639-201ENST00000384974 98 ntBASIC19.48■□□□□ 0.71
HIST1H1DP16402 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.48■□□□□ 0.71
HIST1H1DP16402 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H1DP16402 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIST1H1DP16402 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HIST1H1DP16402 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIST1H1DP16402 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HIST1H1DP16402 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.47■□□□□ 0.71
HIST1H1DP16402 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.46■□□□□ 0.71
HIST1H1DP16402 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
HIST1H1DP16402 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST1H1DP16402 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST1H1DP16402 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.46■□□□□ 0.71
HIST1H1DP16402 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.46■□□□□ 0.71
HIST1H1DP16402 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST1H1DP16402 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST1H1DP16402 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HIST1H1DP16402 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HIST1H1DP16402 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.46■□□□□ 0.71
HIST1H1DP16402 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H1DP16402 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H1DP16402 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H1DP16402 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HIST1H1DP16402 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HIST1H1DP16402 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H1DP16402 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H1DP16402 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H1DP16402 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H1DP16402 AC092068.2-201ENST00000590491 1708 ntBASIC19.45■□□□□ 0.7
HIST1H1DP16402 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H1DP16402 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H1DP16402 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H1DP16402 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H1DP16402 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H1DP16402 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HIST1H1DP16402 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.44■□□□□ 0.7
HIST1H1DP16402 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HIST1H1DP16402 AC233723.2-201ENST00000623798 2106 ntBASIC19.44■□□□□ 0.7
HIST1H1DP16402 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H1DP16402 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.44■□□□□ 0.7
HIST1H1DP16402 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.44■□□□□ 0.7
HIST1H1DP16402 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.43■□□□□ 0.7
HIST1H1DP16402 AL161729.1-201ENST00000604104 1402 ntBASIC19.43■□□□□ 0.7
HIST1H1DP16402 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST1H1DP16402 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HIST1H1DP16402 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HIST1H1DP16402 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST1H1DP16402 DUSP8P3-201ENST00000399571 1760 ntBASIC19.43■□□□□ 0.7
HIST1H1DP16402 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST1H1DP16402 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.43■□□□□ 0.7
HIST1H1DP16402 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST1H1DP16402 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.43■□□□□ 0.7
HIST1H1DP16402 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HIST1H1DP16402 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.43■□□□□ 0.7
HIST1H1DP16402 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST1H1DP16402 AC090877.2-201ENST00000558441 1738 ntBASIC19.42■□□□□ 0.7
HIST1H1DP16402 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H1DP16402 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.42■□□□□ 0.7
HIST1H1DP16402 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HIST1H1DP16402 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.42■□□□□ 0.7
HIST1H1DP16402 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.42■□□□□ 0.7
HIST1H1DP16402 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H1DP16402 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H1DP16402 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.42■□□□□ 0.7
HIST1H1DP16402 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.42■□□□□ 0.7
HIST1H1DP16402 MIR7108-201ENST00000614319 87 ntBASIC19.42■□□□□ 0.7
HIST1H1DP16402 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H1DP16402 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H1DP16402 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H1DP16402 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H1DP16402 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H1DP16402 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H1DP16402 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HIST1H1DP16402 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.41■□□□□ 0.7
HIST1H1DP16402 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H1DP16402 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H1DP16402 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H1DP16402 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.41■□□□□ 0.7
HIST1H1DP16402 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.41■□□□□ 0.7
HIST1H1DP16402 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HIST1H1DP16402 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HIST1H1DP16402 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms