Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
THBS1P07996 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.17■□□□□ 0.98
THBS1P07996 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
THBS1P07996 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
THBS1P07996 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.17■□□□□ 0.98
THBS1P07996 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
THBS1P07996 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
THBS1P07996 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
THBS1P07996 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.17■□□□□ 0.98
THBS1P07996 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
THBS1P07996 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
THBS1P07996 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
THBS1P07996 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
THBS1P07996 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
THBS1P07996 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
THBS1P07996 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
THBS1P07996 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
THBS1P07996 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.16■□□□□ 0.98
THBS1P07996 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
THBS1P07996 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
THBS1P07996 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
THBS1P07996 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
THBS1P07996 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
THBS1P07996 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
THBS1P07996 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
THBS1P07996 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.15■□□□□ 0.98
THBS1P07996 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.15■□□□□ 0.98
THBS1P07996 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
THBS1P07996 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.15■□□□□ 0.98
THBS1P07996 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
THBS1P07996 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
THBS1P07996 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
THBS1P07996 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
THBS1P07996 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
THBS1P07996 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
THBS1P07996 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.14■□□□□ 0.97
THBS1P07996 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.14■□□□□ 0.97
THBS1P07996 AC120024.1-201ENST00000562672 995 ntBASIC21.14■□□□□ 0.97
THBS1P07996 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
THBS1P07996 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.14■□□□□ 0.97
THBS1P07996 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.14■□□□□ 0.97
THBS1P07996 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
THBS1P07996 DUSP8P5-201ENST00000422884 1815 ntBASIC21.13■□□□□ 0.97
THBS1P07996 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
THBS1P07996 KRT18P24-201ENST00000344739 1156 ntBASIC21.13■□□□□ 0.97
THBS1P07996 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.13■□□□□ 0.97
THBS1P07996 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.13■□□□□ 0.97
THBS1P07996 PVT1_1.1-201ENST00000615125 194 ntBASIC21.13■□□□□ 0.97
THBS1P07996 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THBS1P07996 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THBS1P07996 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THBS1P07996 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
THBS1P07996 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.12■□□□□ 0.97
THBS1P07996 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
THBS1P07996 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.12■□□□□ 0.97
THBS1P07996 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.12■□□□□ 0.97
THBS1P07996 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.12■□□□□ 0.97
THBS1P07996 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THBS1P07996 AC131274.2-201ENST00000580697 1507 ntBASIC21.12■□□□□ 0.97
THBS1P07996 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.12■□□□□ 0.97
THBS1P07996 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THBS1P07996 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
THBS1P07996 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
THBS1P07996 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THBS1P07996 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
THBS1P07996 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THBS1P07996 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.11■□□□□ 0.97
THBS1P07996 RARRES2P1-201ENST00000474487 481 ntBASIC21.11■□□□□ 0.97
THBS1P07996 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
THBS1P07996 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
THBS1P07996 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.1■□□□□ 0.97
THBS1P07996 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.1■□□□□ 0.97
THBS1P07996 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THBS1P07996 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THBS1P07996 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THBS1P07996 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.1■□□□□ 0.97
THBS1P07996 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.1■□□□□ 0.97
THBS1P07996 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
THBS1P07996 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.1■□□□□ 0.97
THBS1P07996 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.1■□□□□ 0.97
THBS1P07996 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.1■□□□□ 0.97
THBS1P07996 AC010980.1-201ENST00000587192 1142 ntBASIC21.1■□□□□ 0.97
THBS1P07996 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.1■□□□□ 0.97
THBS1P07996 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.1■□□□□ 0.97
THBS1P07996 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
THBS1P07996 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
THBS1P07996 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
THBS1P07996 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.09■□□□□ 0.97
THBS1P07996 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.09■□□□□ 0.97
THBS1P07996 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
THBS1P07996 THA1P-201ENST00000590384 1145 ntBASIC21.09■□□□□ 0.97
THBS1P07996 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
THBS1P07996 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.09■□□□□ 0.97
THBS1P07996 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.09■□□□□ 0.97
THBS1P07996 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
THBS1P07996 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.08■□□□□ 0.97
THBS1P07996 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.08■□□□□ 0.97
THBS1P07996 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
THBS1P07996 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
THBS1P07996 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms