Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ERCC1P07992 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC1P07992 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC1P07992 AL592295.1-201ENST00000400984 884 ntBASIC20.24■□□□□ 0.83
ERCC1P07992 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC1P07992 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.24■□□□□ 0.83
ERCC1P07992 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC1P07992 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC1P07992 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ERCC1P07992 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC1P07992 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC1P07992 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC1P07992 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC1P07992 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC1P07992 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.23■□□□□ 0.83
ERCC1P07992 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.23■□□□□ 0.83
ERCC1P07992 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC1P07992 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC1P07992 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC1P07992 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC1P07992 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC1P07992 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC1P07992 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC1P07992 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.22■□□□□ 0.83
ERCC1P07992 KRT125P-201ENST00000546827 989 ntBASIC20.22■□□□□ 0.83
ERCC1P07992 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ERCC1P07992 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC1P07992 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC1P07992 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.22■□□□□ 0.83
ERCC1P07992 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC1P07992 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ERCC1P07992 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ERCC1P07992 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC1P07992 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC1P07992 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC1P07992 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC1P07992 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC1P07992 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
ERCC1P07992 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC1P07992 BX664725.1-201ENST00000438252 379 ntBASIC20.21■□□□□ 0.83
ERCC1P07992 Z92544.1-202ENST00000571933 1220 ntBASIC20.21■□□□□ 0.83
ERCC1P07992 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
ERCC1P07992 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC1P07992 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC1P07992 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ERCC1P07992 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC1P07992 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
ERCC1P07992 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC1P07992 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC1P07992 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC1P07992 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ERCC1P07992 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC1P07992 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC1P07992 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC1P07992 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC1P07992 KRT18P24-201ENST00000344739 1156 ntBASIC20.2■□□□□ 0.82
ERCC1P07992 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.2■□□□□ 0.82
ERCC1P07992 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC1P07992 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC1P07992 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.2■□□□□ 0.82
ERCC1P07992 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC1P07992 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC1P07992 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC1P07992 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC1P07992 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC1P07992 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC1P07992 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC1P07992 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC1P07992 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC1P07992 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC1P07992 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC1P07992 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ERCC1P07992 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC1P07992 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ERCC1P07992 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC1P07992 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC1P07992 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ERCC1P07992 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.18■□□□□ 0.82
ERCC1P07992 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC1P07992 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC1P07992 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC1P07992 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC1P07992 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC1P07992 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC1P07992 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC1P07992 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
ERCC1P07992 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.17■□□□□ 0.82
ERCC1P07992 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.17■□□□□ 0.82
ERCC1P07992 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.17■□□□□ 0.82
ERCC1P07992 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC1P07992 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC1P07992 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ERCC1P07992 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC1P07992 AC012676.1-201ENST00000574705 1949 ntBASIC20.17■□□□□ 0.82
ERCC1P07992 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ERCC1P07992 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC1P07992 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.16■□□□□ 0.82
ERCC1P07992 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC1P07992 AC239859.2-201ENST00000444165 318 ntBASIC20.16■□□□□ 0.82
ERCC1P07992 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms