Protein–RNA interactions for Protein: O43272

PRODH, Proline dehydrogenase 1, mitochondrial, humanhuman

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRODHO43272 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRODHO43272 AL117328.2-201ENST00000624617 1940 ntBASIC20.77■□□□□ 0.92
PRODHO43272 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.77■□□□□ 0.92
PRODHO43272 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.77■□□□□ 0.91
PRODHO43272 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRODHO43272 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRODHO43272 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRODHO43272 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRODHO43272 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.76■□□□□ 0.91
PRODHO43272 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.76■□□□□ 0.91
PRODHO43272 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.76■□□□□ 0.91
PRODHO43272 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRODHO43272 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRODHO43272 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRODHO43272 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRODHO43272 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRODHO43272 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRODHO43272 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PRODHO43272 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PRODHO43272 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PRODHO43272 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRODHO43272 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.75■□□□□ 0.91
PRODHO43272 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRODHO43272 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.75■□□□□ 0.91
PRODHO43272 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.75■□□□□ 0.91
PRODHO43272 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.75■□□□□ 0.91
PRODHO43272 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PRODHO43272 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRODHO43272 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PRODHO43272 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.75■□□□□ 0.91
PRODHO43272 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRODHO43272 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRODHO43272 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.74■□□□□ 0.91
PRODHO43272 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.74■□□□□ 0.91
PRODHO43272 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRODHO43272 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.74■□□□□ 0.91
PRODHO43272 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRODHO43272 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRODHO43272 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRODHO43272 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRODHO43272 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRODHO43272 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PRODHO43272 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRODHO43272 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRODHO43272 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRODHO43272 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRODHO43272 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
PRODHO43272 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRODHO43272 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRODHO43272 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.73■□□□□ 0.91
PRODHO43272 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRODHO43272 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PRODHO43272 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.73■□□□□ 0.91
PRODHO43272 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PRODHO43272 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRODHO43272 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRODHO43272 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRODHO43272 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.72■□□□□ 0.91
PRODHO43272 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRODHO43272 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRODHO43272 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRODHO43272 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRODHO43272 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRODHO43272 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.71■□□□□ 0.91
PRODHO43272 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRODHO43272 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PRODHO43272 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PRODHO43272 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRODHO43272 GPX1-201ENST00000419349 1106 ntBASIC20.71■□□□□ 0.91
PRODHO43272 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.71■□□□□ 0.91
PRODHO43272 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
PRODHO43272 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRODHO43272 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.71■□□□□ 0.91
PRODHO43272 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.71■□□□□ 0.91
PRODHO43272 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRODHO43272 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRODHO43272 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PRODHO43272 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
PRODHO43272 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.7■□□□□ 0.9
PRODHO43272 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRODHO43272 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRODHO43272 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.7■□□□□ 0.9
PRODHO43272 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRODHO43272 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRODHO43272 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRODHO43272 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PRODHO43272 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.7■□□□□ 0.9
PRODHO43272 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRODHO43272 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRODHO43272 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRODHO43272 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRODHO43272 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRODHO43272 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRODHO43272 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRODHO43272 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRODHO43272 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.69■□□□□ 0.9
PRODHO43272 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRODHO43272 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRODHO43272 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRODHO43272 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms