Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.49■□□□□ 0.71
SHOXO15266 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHOXO15266 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SHOXO15266 AC233723.2-201ENST00000623798 2106 ntBASIC19.49■□□□□ 0.71
SHOXO15266 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHOXO15266 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHOXO15266 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHOXO15266 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHOXO15266 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHOXO15266 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHOXO15266 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHOXO15266 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SHOXO15266 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHOXO15266 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHOXO15266 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SHOXO15266 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHOXO15266 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHOXO15266 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHOXO15266 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHOXO15266 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHOXO15266 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHOXO15266 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SHOXO15266 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.47■□□□□ 0.71
SHOXO15266 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SHOXO15266 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.47■□□□□ 0.71
SHOXO15266 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHOXO15266 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SHOXO15266 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHOXO15266 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHOXO15266 AC127496.7-201ENST00000625110 1798 ntBASIC19.47■□□□□ 0.71
SHOXO15266 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHOXO15266 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHOXO15266 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.46■□□□□ 0.71
SHOXO15266 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHOXO15266 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SHOXO15266 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHOXO15266 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.46■□□□□ 0.71
SHOXO15266 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.46■□□□□ 0.71
SHOXO15266 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.46■□□□□ 0.71
SHOXO15266 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHOXO15266 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHOXO15266 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHOXO15266 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.45■□□□□ 0.7
SHOXO15266 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.45■□□□□ 0.7
SHOXO15266 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHOXO15266 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHOXO15266 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.45■□□□□ 0.7
SHOXO15266 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHOXO15266 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHOXO15266 AC060814.1-201ENST00000554326 538 ntBASIC19.45■□□□□ 0.7
SHOXO15266 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHOXO15266 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SHOXO15266 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SHOXO15266 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SHOXO15266 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHOXO15266 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.44■□□□□ 0.7
SHOXO15266 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.44■□□□□ 0.7
SHOXO15266 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHOXO15266 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHOXO15266 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.44■□□□□ 0.7
SHOXO15266 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHOXO15266 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHOXO15266 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.43■□□□□ 0.7
SHOXO15266 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
SHOXO15266 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.43■□□□□ 0.7
SHOXO15266 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SHOXO15266 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.43■□□□□ 0.7
SHOXO15266 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHOXO15266 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.43■□□□□ 0.7
SHOXO15266 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SHOXO15266 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHOXO15266 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHOXO15266 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHOXO15266 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SHOXO15266 AL157400.5-201ENST00000507624 621 ntBASIC19.42■□□□□ 0.7
SHOXO15266 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHOXO15266 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHOXO15266 AC073130.3-201ENST00000624389 2278 ntBASIC19.42■□□□□ 0.7
SHOXO15266 AL137060.1-201ENST00000618151 2648 ntBASIC19.42■□□□□ 0.7
SHOXO15266 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHOXO15266 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHOXO15266 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHOXO15266 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHOXO15266 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.42■□□□□ 0.7
SHOXO15266 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHOXO15266 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.41■□□□□ 0.7
SHOXO15266 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SHOXO15266 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHOXO15266 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHOXO15266 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHOXO15266 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHOXO15266 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHOXO15266 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.41■□□□□ 0.7
SHOXO15266 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.41■□□□□ 0.7
SHOXO15266 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHOXO15266 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHOXO15266 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SHOXO15266 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.4■□□□□ 0.7
SHOXO15266 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SHOXO15266 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms