Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
ABCD4O14678 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCD4O14678 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCD4O14678 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCD4O14678 AF131216.4-201ENST00000638924 1588 ntBASIC20.22■□□□□ 0.83
ABCD4O14678 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCD4O14678 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.22■□□□□ 0.83
ABCD4O14678 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.22■□□□□ 0.83
ABCD4O14678 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.22■□□□□ 0.83
ABCD4O14678 MTDHP2-201ENST00000601468 714 ntBASIC20.22■□□□□ 0.83
ABCD4O14678 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ABCD4O14678 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCD4O14678 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCD4O14678 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCD4O14678 DUSP8P4-201ENST00000399538 1761 ntBASIC20.21■□□□□ 0.83
ABCD4O14678 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.21■□□□□ 0.83
ABCD4O14678 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ABCD4O14678 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.21■□□□□ 0.83
ABCD4O14678 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ABCD4O14678 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.21■□□□□ 0.83
ABCD4O14678 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCD4O14678 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.2■□□□□ 0.82
ABCD4O14678 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.2■□□□□ 0.82
ABCD4O14678 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.2■□□□□ 0.82
ABCD4O14678 AC010997.5-201ENST00000609182 354 ntBASIC20.2■□□□□ 0.82
ABCD4O14678 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.2■□□□□ 0.82
ABCD4O14678 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ABCD4O14678 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCD4O14678 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCD4O14678 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.2■□□□□ 0.82
ABCD4O14678 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
ABCD4O14678 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCD4O14678 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCD4O14678 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
ABCD4O14678 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.19■□□□□ 0.82
ABCD4O14678 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCD4O14678 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCD4O14678 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCD4O14678 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ABCD4O14678 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ABCD4O14678 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ABCD4O14678 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.18■□□□□ 0.82
ABCD4O14678 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ABCD4O14678 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.18■□□□□ 0.82
ABCD4O14678 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ABCD4O14678 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.18■□□□□ 0.82
ABCD4O14678 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
ABCD4O14678 AC008406.3-201ENST00000620001 1374 ntBASIC20.17■□□□□ 0.82
ABCD4O14678 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCD4O14678 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCD4O14678 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ABCD4O14678 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
ABCD4O14678 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ABCD4O14678 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ABCD4O14678 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ABCD4O14678 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ABCD4O14678 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ABCD4O14678 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.16■□□□□ 0.82
ABCD4O14678 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.16■□□□□ 0.82
ABCD4O14678 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.16■□□□□ 0.82
ABCD4O14678 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ABCD4O14678 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ABCD4O14678 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ABCD4O14678 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ABCD4O14678 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ABCD4O14678 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.15■□□□□ 0.82
ABCD4O14678 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ABCD4O14678 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ABCD4O14678 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ABCD4O14678 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.15■□□□□ 0.82
ABCD4O14678 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.15■□□□□ 0.82
ABCD4O14678 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.15■□□□□ 0.82
ABCD4O14678 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ABCD4O14678 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ABCD4O14678 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ABCD4O14678 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ABCD4O14678 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.14■□□□□ 0.81
ABCD4O14678 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.14■□□□□ 0.81
ABCD4O14678 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.14■□□□□ 0.81
ABCD4O14678 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ABCD4O14678 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.14■□□□□ 0.81
ABCD4O14678 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
ABCD4O14678 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ABCD4O14678 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCD4O14678 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ABCD4O14678 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCD4O14678 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCD4O14678 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCD4O14678 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.13■□□□□ 0.81
ABCD4O14678 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.13■□□□□ 0.81
ABCD4O14678 MIR6724-1-201ENST00000616420 92 ntBASIC20.13■□□□□ 0.81
ABCD4O14678 MIR6724-2-201ENST00000616483 92 ntBASIC20.13■□□□□ 0.81
ABCD4O14678 MIR6724-4-201ENST00000617390 92 ntBASIC20.13■□□□□ 0.81
ABCD4O14678 MIR6724-3-201ENST00000622482 92 ntBASIC20.13■□□□□ 0.81
ABCD4O14678 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCD4O14678 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
ABCD4O14678 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCD4O14678 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCD4O14678 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCD4O14678 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms