Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01546A6NGU7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01546A6NGU7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LINC01546A6NGU7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.36■□□□□ 0.21
LINC01546A6NGU7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC01546A6NGU7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC01546A6NGU7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
LINC01546A6NGU7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC01546A6NGU7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01546A6NGU7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LINC01546A6NGU7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LINC01546A6NGU7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01546A6NGU7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
LINC01546A6NGU7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LINC01546A6NGU7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.34■□□□□ 0.21
LINC01546A6NGU7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01546A6NGU7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01546A6NGU7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01546A6NGU7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.34■□□□□ 0.21
LINC01546A6NGU7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINC01546A6NGU7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC01546A6NGU7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01546A6NGU7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LINC01546A6NGU7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01546A6NGU7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC01546A6NGU7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01546A6NGU7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC01546A6NGU7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC01546A6NGU7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LINC01546A6NGU7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC01546A6NGU7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01546A6NGU7 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC01546A6NGU7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC01546A6NGU7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01546A6NGU7 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC01546A6NGU7 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC01546A6NGU7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01546A6NGU7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.31■□□□□ 0.2
LINC01546A6NGU7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC01546A6NGU7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LINC01546A6NGU7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC01546A6NGU7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01546A6NGU7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01546A6NGU7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01546A6NGU7 AL137060.1-201ENST00000618151 2648 ntBASIC16.3■□□□□ 0.2
LINC01546A6NGU7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LINC01546A6NGU7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01546A6NGU7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC01546A6NGU7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC01546A6NGU7 SLC25A24-204ENST00000569674 2357 ntBASIC16.3■□□□□ 0.2
LINC01546A6NGU7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01546A6NGU7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC01546A6NGU7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC01546A6NGU7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01546A6NGU7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
LINC01546A6NGU7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 AC021231.2-201ENST00000594613 730 ntBASIC16.29■□□□□ 0.2
LINC01546A6NGU7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms