Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.26■□□□□ 0.19
TRBV27A0A0K0K1C4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.26■□□□□ 0.19
TRBV27A0A0K0K1C4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV27A0A0K0K1C4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV27A0A0K0K1C4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV27A0A0K0K1C4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV27A0A0K0K1C4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV27A0A0K0K1C4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
TRBV27A0A0K0K1C4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV27A0A0K0K1C4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV27A0A0K0K1C4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV27A0A0K0K1C4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV27A0A0K0K1C4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRBV27A0A0K0K1C4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV27A0A0K0K1C4 AL161729.1-201ENST00000604104 1402 ntBASIC16.25■□□□□ 0.19
TRBV27A0A0K0K1C4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV27A0A0K0K1C4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV27A0A0K0K1C4 EP400NL-214ENST00000641289 2402 ntBASIC16.25■□□□□ 0.19
TRBV27A0A0K0K1C4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV27A0A0K0K1C4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRBV27A0A0K0K1C4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRBV27A0A0K0K1C4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV27A0A0K0K1C4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV27A0A0K0K1C4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.24■□□□□ 0.19
TRBV27A0A0K0K1C4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV27A0A0K0K1C4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV27A0A0K0K1C4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV27A0A0K0K1C4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV27A0A0K0K1C4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 AC016575.1-201ENST00000607026 382 ntBASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV27A0A0K0K1C4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 LINC00565-201ENST00000562710 2331 ntBASIC16.22■□□□□ 0.19
TRBV27A0A0K0K1C4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRBV27A0A0K0K1C4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRBV27A0A0K0K1C4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV27A0A0K0K1C4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV27A0A0K0K1C4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV27A0A0K0K1C4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV27A0A0K0K1C4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV27A0A0K0K1C4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRBV27A0A0K0K1C4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV27A0A0K0K1C4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV27A0A0K0K1C4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV27A0A0K0K1C4 C1orf229-201ENST00000623686 2258 ntBASIC16.21■□□□□ 0.19
TRBV27A0A0K0K1C4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRBV27A0A0K0K1C4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
TRBV27A0A0K0K1C4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.21■□□□□ 0.18
TRBV27A0A0K0K1C4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms