Protein–RNA interactions for Protein: A0A0K0K1A5

TRBV6-5, T-cell receptor beta variable 6-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5A0A0K0K1A5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-5A0A0K0K1A5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-5A0A0K0K1A5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TRBV6-5A0A0K0K1A5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-5A0A0K0K1A5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRBV6-5A0A0K0K1A5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRBV6-5A0A0K0K1A5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-5A0A0K0K1A5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-5A0A0K0K1A5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-5A0A0K0K1A5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRBV6-5A0A0K0K1A5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-5A0A0K0K1A5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-5A0A0K0K1A5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-5A0A0K0K1A5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-5A0A0K0K1A5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-5A0A0K0K1A5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-5A0A0K0K1A5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-5A0A0K0K1A5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-5A0A0K0K1A5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-5A0A0K0K1A5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-5A0A0K0K1A5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRBV6-5A0A0K0K1A5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV6-5A0A0K0K1A5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-5A0A0K0K1A5 AC007029.1-201ENST00000604183 313 ntBASIC16.28■□□□□ 0.2
TRBV6-5A0A0K0K1A5 RAP2CP1-202ENST00000605179 643 ntBASIC16.28■□□□□ 0.2
TRBV6-5A0A0K0K1A5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRBV6-5A0A0K0K1A5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV6-5A0A0K0K1A5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-5A0A0K0K1A5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-5A0A0K0K1A5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-5A0A0K0K1A5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
TRBV6-5A0A0K0K1A5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV6-5A0A0K0K1A5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRBV6-5A0A0K0K1A5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRBV6-5A0A0K0K1A5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV6-5A0A0K0K1A5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-5A0A0K0K1A5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-5A0A0K0K1A5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.27■□□□□ 0.2
TRBV6-5A0A0K0K1A5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV6-5A0A0K0K1A5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV6-5A0A0K0K1A5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV6-5A0A0K0K1A5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV6-5A0A0K0K1A5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-5A0A0K0K1A5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-5A0A0K0K1A5 ABHD17AP4-201ENST00000411545 909 ntBASIC16.26■□□□□ 0.19
TRBV6-5A0A0K0K1A5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRBV6-5A0A0K0K1A5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRBV6-5A0A0K0K1A5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-5A0A0K0K1A5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-5A0A0K0K1A5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-5A0A0K0K1A5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-5A0A0K0K1A5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
TRBV6-5A0A0K0K1A5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 AC026202.3-201ENST00000600805 1127 ntBASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 AC127496.7-201ENST00000625110 1798 ntBASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-5A0A0K0K1A5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-5A0A0K0K1A5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRBV6-5A0A0K0K1A5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRBV6-5A0A0K0K1A5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-5A0A0K0K1A5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV6-5A0A0K0K1A5 AC090877.2-201ENST00000558441 1738 ntBASIC16.24■□□□□ 0.19
TRBV6-5A0A0K0K1A5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-5A0A0K0K1A5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRBV6-5A0A0K0K1A5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRBV6-5A0A0K0K1A5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV6-5A0A0K0K1A5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-5A0A0K0K1A5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms